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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR006083
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We have found 44 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 6.229s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0080819.1
n.a. P-loop containing nucleoside triphosphate hydrolases superfamily protein isoform 2 [Theobroma cacao] gi|508709082|gb|EOY00979.1| chr0 31383480 31393895 -
2 domain predictions
2 GO terms
Lj0g3v0080819.2
n.a. phosphoribulokinase/uridine kinase domain protein [Arabidopsis thaliana] gi|334184093|ref|NP_178255.5| chr0 31383480 31393895 -
2 domain predictions
2 GO terms
Lj0g3v0350949.1
n.a. PREDICTED: uridine-cytidine kinase C-like [Glycine max] gi|356498109|ref|XP_003517896.1| chr0 184507609 184510524 -
2 domain predictions
2 GO terms
Lj1g3v3834320.1
n.a. PREDICTED: uridine kinase-like protein 1, chloroplastic-like [Glycine max] gi|356558725|ref|XP_003547653.1| chr1 43699832 43706563 -
2 domain predictions
2 GO terms
Lj1g3v3834320.2
n.a. PREDICTED: uridine kinase-like protein 1, chloroplastic-like [Glycine max] gi|356558725|ref|XP_003547653.1| chr1 43699832 43706563 -
2 domain predictions
2 GO terms
Lj1g3v4450530.1
n.a. PREDICTED: ATP-dependent kinase YFH7-like isoform X1 [Cicer arietinum] gi|502109842|ref|XP_004493740.1| chr1 52228301 52242733 -
2 domain predictions
2 GO terms
Lj2g3v1196760.1
n.a. PREDICTED: uridine-cytidine kinase C-like [Glycine max] gi|356499984|ref|XP_003518815.1| chr2 19079378 19091179 -
2 domain predictions
2 GO terms
Lj2g3v1196760.2
n.a. PREDICTED: uridine-cytidine kinase C-like [Glycine max] gi|356499984|ref|XP_003518815.1| chr2 19079378 19091179 -
2 domain predictions
2 GO terms
Lj2g3v1536250.1
n.a. PREDICTED: phosphoribulokinase, chloroplastic-like [Cicer arietinum] gi|502162280|ref|XP_004512451.1| chr2 24139427 24142565 +
2 domain predictions
2 GO terms
Lj2g3v3319240.1
n.a. PREDICTED: uridine kinase-like protein 4-like [Glycine max] gi|356552443|ref|XP_003544577.1| chr2 42042180 42052839 +
2 domain predictions
2 GO terms
Lj2g3v3319240.2
n.a. PREDICTED: uridine kinase-like protein 4-like [Glycine max] gi|356552443|ref|XP_003544577.1| chr2 42042180 42054671 +
2 domain predictions
2 GO terms
Lj2g3v3319240.3
n.a. PREDICTED: uridine kinase-like protein 4-like [Glycine max] gi|356552443|ref|XP_003544577.1| chr2 42042180 42052839 +
2 domain predictions
2 GO terms
Lj4g3v0632220.1
n.a. P-loop containing nucleoside triphosphate hydrolases superfamily protein isoform 1 [Theobroma cacao] gi|508709081|gb|EOY00978.1| chr4 9939167 9943109 +
2 domain predictions
2 GO terms
Lj4g3v1388350.1
n.a. PREDICTED: uridine kinase-like protein 2, chloroplastic-like [Cicer arietinum] gi|502176210|ref|XP_004515823.1| chr4 21338623 21344031 -
2 domain predictions
2 GO terms
Lj4g3v1388350.2
n.a. PREDICTED: uridine kinase-like protein 2, chloroplastic-like [Cicer arietinum] gi|502176210|ref|XP_004515823.1| chr4 21339075 21344031 -
2 domain predictions
2 GO terms
Lj4g3v1388350.3
n.a. PREDICTED: uridine kinase-like protein 2, chloroplastic-like [Cicer arietinum] gi|502176210|ref|XP_004515823.1| chr4 21339075 21344031 -
2 domain predictions
2 GO terms
Lj4g3v1748290.1
n.a. PREDICTED: uridine-cytidine kinase C-like [Glycine max] gi|356511573|ref|XP_003524499.1| chr4 25006409 25013607 +
2 domain predictions
2 GO terms
Lj5g3v0412360.1
n.a. PREDICTED: uridine kinase-like protein 4-like [Glycine max] gi|356527242|ref|XP_003532221.1| chr5 4137361 4143326 +
2 domain predictions
2 GO terms
Lj5g3v0412360.2
n.a. PREDICTED: uridine kinase-like protein 4-like [Glycine max] gi|356527242|ref|XP_003532221.1| chr5 4137361 4143783 +
2 domain predictions
2 GO terms
LotjaGi1g1v0013000.2
n.a. Uridine kinase; TAIR: AT4G26510.1 uridine kinase-like 4; Swiss-Prot: sp|O65583|UKL4_ARATH Uridine kinase-like protein 4; TrEMBL-Plants: tr|A0A0B2QUU5|A0A0B2QUU5_GLYSO Fructose-bisphosphate aldolase; Found in the gene: LotjaGi1g1v0013000 LjG1.1_chr1 1661643 1666511 -
2 domain predictions
2 GO terms
LotjaGi1g1v0013000.3
n.a. Uridine kinase; TAIR: AT4G26510.1 uridine kinase-like 4; Swiss-Prot: sp|O65583|UKL4_ARATH Uridine kinase-like protein 4; TrEMBL-Plants: tr|A0A0B2QUU5|A0A0B2QUU5_GLYSO Fructose-bisphosphate aldolase; Found in the gene: LotjaGi1g1v0013000 LjG1.1_chr1 1661643 1667145 -
2 domain predictions
2 GO terms
LotjaGi1g1v0622900.1
n.a. Uridine kinase; TAIR: AT5G40870.1 uridine kinase/uracil phosphoribosyltransferase 1; Swiss-Prot: sp|Q9FKS0|UKL1_ARATH Uridine kinase-like protein 1, chloroplastic; TrEMBL-Plants: tr|I1MLJ3|I1MLJ3_SOYBN Uridine kinase; Found in the gene: LotjaGi1g1v0622900 LjG1.1_chr1 117006876 117012928 -
2 domain predictions
2 GO terms
LotjaGi1g1v0622900.2
n.a. Uridine kinase; TAIR: AT5G40870.1 uridine kinase/uracil phosphoribosyltransferase 1; Swiss-Prot: sp|Q9FKS0|UKL1_ARATH Uridine kinase-like protein 1, chloroplastic; TrEMBL-Plants: tr|A0A0S3RWI8|A0A0S3RWI8_PHAAN Uridine kinase; Found in the gene: LotjaGi1g1v0622900 LjG1.1_chr1 117007433 117012669 -
2 domain predictions
2 GO terms
LotjaGi1g1v0713600.1
n.a. Uridine kinase-like; TAIR: AT1G03030.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|Q9UTC5|YIDE_SCHPO Putative uridine kinase C227.14; TrEMBL-Plants: tr|I1N9M3|I1N9M3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0713600 LjG1.1_chr1 128172252 128182677 +
2 domain predictions
2 GO terms
LotjaGi1g1v0713600.2
n.a. Uridine kinase-like; TAIR: AT1G03030.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|Q9UTC5|YIDE_SCHPO Putative uridine kinase C227.14; TrEMBL-Plants: tr|I1N9M3|I1N9M3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0713600 LjG1.1_chr1 128172263 128182408 +
2 domain predictions
2 GO terms
LotjaGi2g1v0075500.1
n.a. Uridine kinase; TAIR: AT3G27440.1 uridine kinase-like 5; Swiss-Prot: sp|Q9LTY6|UKL5_ARATH Uridine kinase-like protein 5; TrEMBL-Plants: tr|A0A1J7HJ27|A0A1J7HJ27_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0075500 LjG1.1_chr2 19759037 19770794 -
2 domain predictions
2 GO terms
LotjaGi2g1v0075500.2
n.a. uridine kinase/uracil phosphoribosyltransferase 1; TAIR: AT3G27440.1 uridine kinase-like 5; Swiss-Prot: sp|Q9LTY6|UKL5_ARATH Uridine kinase-like protein 5; TrEMBL-Plants: tr|A0A1J7HJ27|A0A1J7HJ27_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0075500 LjG1.1_chr2 19759442 19763992 -
2 domain predictions
2 GO terms
LotjaGi2g1v0286900.1
n.a. Uridine kinase; TAIR: AT1G26190.1 Phosphoribulokinase / Uridine kinase family; Swiss-Prot: sp|Q54R62|UCKC_DICDI Uridine-cytidine kinase C; TrEMBL-Plants: tr|K7K801|K7K801_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0286900 LjG1.1_chr2 75978382 75988303 -
2 domain predictions
2 GO terms
LotjaGi2g1v0286900.2
n.a. Uridine kinase; TAIR: AT1G26190.1 Phosphoribulokinase / Uridine kinase family; Swiss-Prot: sp|Q54R62|UCKC_DICDI Uridine-cytidine kinase C; TrEMBL-Plants: tr|K7K801|K7K801_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0286900 LjG1.1_chr2 75978672 75987934 -
2 domain predictions
2 GO terms
LotjaGi2g1v0286900.3
n.a. Uridine kinase; TAIR: AT1G26190.1 Phosphoribulokinase / Uridine kinase family; Swiss-Prot: sp|Q54R62|UCKC_DICDI Uridine-cytidine kinase C; TrEMBL-Plants: tr|K7K801|K7K801_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0286900 LjG1.1_chr2 75979099 75986676 -
2 domain predictions
2 GO terms
LotjaGi2g1v0340500.1
n.a. Phosphoribulokinase; TAIR: AT1G32060.1 phosphoribulokinase; Swiss-Prot: sp|P27774|KPPR_MESCR Phosphoribulokinase, chloroplastic; TrEMBL-Plants: tr|A0A151SI13|A0A151SI13_CAJCA Phosphoribulokinase; Found in the gene: LotjaGi2g1v0340500 LjG1.1_chr2 81742546 81745965 +
2 domain predictions
2 GO terms
LotjaGi4g1v0080700.1
n.a. Uridine kinase; TAIR: AT2G01460.3 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|Q54R62|UCKC_DICDI Uridine-cytidine kinase C; TrEMBL-Plants: tr|I1KM57|I1KM57_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0080700 LjG1.1_chr4 10515202 10539267 +
2 domain predictions
2 GO terms
LotjaGi4g1v0080700.2
n.a. Uridine kinase; TAIR: AT2G01460.3 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|Q54R62|UCKC_DICDI Uridine-cytidine kinase C; TrEMBL-Plants: tr|I1KM57|I1KM57_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0080700 LjG1.1_chr4 10515230 10538600 +
2 domain predictions
2 GO terms
LotjaGi4g1v0080700.3
n.a. Uridine kinase; TAIR: AT2G01460.3 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|Q54R62|UCKC_DICDI Uridine-cytidine kinase C; TrEMBL-Plants: tr|I1KM57|I1KM57_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0080700 LjG1.1_chr4 10515499 10538082 +
2 domain predictions
2 GO terms
LotjaGi4g1v0080700.4
n.a. Uridine kinase; TAIR: AT2G01460.3 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|Q54R62|UCKC_DICDI Uridine-cytidine kinase C; TrEMBL-Plants: tr|A0A0B2PKG2|A0A0B2PKG2_GLYSO Uridine-cytidine kinase C; Found in the gene: LotjaGi4g1v0080700 LjG1.1_chr4 10515499 10538082 +
2 domain predictions
2 GO terms
LotjaGi4g1v0153200.1
n.a. Uridine kinase; TAIR: AT1G26190.1 Phosphoribulokinase / Uridine kinase family; Swiss-Prot: sp|Q54R62|UCKC_DICDI Uridine-cytidine kinase C; TrEMBL-Plants: tr|K7K801|K7K801_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0153200 LjG1.1_chr4 25444758 25455761 -
2 domain predictions
2 GO terms
LotjaGi4g1v0222600.1
n.a. Uridine kinase; TAIR: AT5G40870.1 uridine kinase/uracil phosphoribosyltransferase 1; Swiss-Prot: sp|Q9FKS0|UKL1_ARATH Uridine kinase-like protein 1, chloroplastic; TrEMBL-Plants: tr|I1MUP0|I1MUP0_SOYBN Uridine kinase; Found in the gene: LotjaGi4g1v0222600 LjG1.1_chr4 52763851 52768972 -
2 domain predictions
2 GO terms
LotjaGi4g1v0259100.1
n.a. Uridine kinase; TAIR: AT1G73980.1 Phosphoribulokinase / Uridine kinase family; Swiss-Prot: sp|Q54R62|UCKC_DICDI Uridine-cytidine kinase C; TrEMBL-Plants: tr|A0A0R0JPT3|A0A0R0JPT3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0259100 LjG1.1_chr4 61458723 61466678 +
2 domain predictions
2 GO terms
LotjaGi4g1v0259100.2
n.a. Uridine kinase; TAIR: AT1G73980.1 Phosphoribulokinase / Uridine kinase family; Swiss-Prot: sp|Q54R62|UCKC_DICDI Uridine-cytidine kinase C; TrEMBL-Plants: tr|A0A0R0JPT3|A0A0R0JPT3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0259100 LjG1.1_chr4 61459762 61465967 +
2 domain predictions
2 GO terms
LotjaGi6g1v0139200.1
n.a. Uridine kinase; TAIR: AT1G55810.1 uridine kinase-like 3; Swiss-Prot: sp|Q8VYB2|UKL3_ARATH Uridine kinase-like protein 3; TrEMBL-Plants: tr|V7BNR6|V7BNR6_PHAVU Uridine kinase; Found in the gene: LotjaGi6g1v0139200 LjG1.1_chr6 40438329 40445837 -
2 domain predictions
2 GO terms
LotjaGi6g1v0139200.2
n.a. Uridine kinase; TAIR: AT1G55810.1 uridine kinase-like 3; Swiss-Prot: sp|Q8VYB2|UKL3_ARATH Uridine kinase-like protein 3; TrEMBL-Plants: tr|V7BNR6|V7BNR6_PHAVU Uridine kinase; Found in the gene: LotjaGi6g1v0139200 LjG1.1_chr6 40438526 40445677 -
2 domain predictions
2 GO terms
LotjaGi6g1v0139200.3
n.a. Uridine kinase; TAIR: AT4G26510.1 uridine kinase-like 4; Swiss-Prot: sp|O65583|UKL4_ARATH Uridine kinase-like protein 4; TrEMBL-Plants: tr|I1KYV2|I1KYV2_SOYBN Uridine kinase; Found in the gene: LotjaGi6g1v0139200 LjG1.1_chr6 40438553 40445732 -
2 domain predictions
2 GO terms
LotjaGi6g1v0139200.4
n.a. Uridine kinase; TAIR: AT4G26510.1 uridine kinase-like 4; Swiss-Prot: sp|O65583|UKL4_ARATH Uridine kinase-like protein 4; TrEMBL-Plants: tr|V7BNR6|V7BNR6_PHAVU Uridine kinase; Found in the gene: LotjaGi6g1v0139200 LjG1.1_chr6 40439191 40444036 -
2 domain predictions
2 GO terms
LotjaGi6g1v0139200.5
n.a. Uridine kinase; TAIR: AT4G26510.1 uridine kinase-like 4; Swiss-Prot: sp|O65583|UKL4_ARATH Uridine kinase-like protein 4; TrEMBL-Plants: tr|I1KYV2|I1KYV2_SOYBN Uridine kinase; Found in the gene: LotjaGi6g1v0139200 LjG1.1_chr6 40439191 40444538 -
2 domain predictions
2 GO terms