Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR000764
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
or

Export options

Download the entire search result as a CSV file.

We have found 27 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.844s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0080819.1
n.a. P-loop containing nucleoside triphosphate hydrolases superfamily protein isoform 2 [Theobroma cacao] gi|508709082|gb|EOY00979.1| chr0 31383480 31393895 -
2 domain predictions
 –
Lj0g3v0080819.2
n.a. phosphoribulokinase/uridine kinase domain protein [Arabidopsis thaliana] gi|334184093|ref|NP_178255.5| chr0 31383480 31393895 -
2 domain predictions
 –
Lj0g3v0350949.1
n.a. PREDICTED: uridine-cytidine kinase C-like [Glycine max] gi|356498109|ref|XP_003517896.1| chr0 184507609 184510524 -
2 domain predictions
 –
Lj1g3v3834320.1
n.a. PREDICTED: uridine kinase-like protein 1, chloroplastic-like [Glycine max] gi|356558725|ref|XP_003547653.1| chr1 43699832 43706563 -
3 domain predictions
 –
Lj1g3v3834320.2
n.a. PREDICTED: uridine kinase-like protein 1, chloroplastic-like [Glycine max] gi|356558725|ref|XP_003547653.1| chr1 43699832 43706563 -
3 domain predictions
 –
Lj2g3v1196760.1
n.a. PREDICTED: uridine-cytidine kinase C-like [Glycine max] gi|356499984|ref|XP_003518815.1| chr2 19079378 19091179 -
2 domain predictions
 –
Lj2g3v1196760.2
n.a. PREDICTED: uridine-cytidine kinase C-like [Glycine max] gi|356499984|ref|XP_003518815.1| chr2 19079378 19091179 -
2 domain predictions
 –
Lj2g3v3319240.1
n.a. PREDICTED: uridine kinase-like protein 4-like [Glycine max] gi|356552443|ref|XP_003544577.1| chr2 42042180 42052839 +
3 domain predictions
 –
Lj2g3v3319240.2
n.a. PREDICTED: uridine kinase-like protein 4-like [Glycine max] gi|356552443|ref|XP_003544577.1| chr2 42042180 42054671 +
3 domain predictions
 –
Lj2g3v3319240.3
n.a. PREDICTED: uridine kinase-like protein 4-like [Glycine max] gi|356552443|ref|XP_003544577.1| chr2 42042180 42052839 +
3 domain predictions
 –
Lj4g3v1388350.1
n.a. PREDICTED: uridine kinase-like protein 2, chloroplastic-like [Cicer arietinum] gi|502176210|ref|XP_004515823.1| chr4 21338623 21344031 -
3 domain predictions
 –
Lj4g3v1388350.2
n.a. PREDICTED: uridine kinase-like protein 2, chloroplastic-like [Cicer arietinum] gi|502176210|ref|XP_004515823.1| chr4 21339075 21344031 -
3 domain predictions
 –
Lj4g3v1388350.3
n.a. PREDICTED: uridine kinase-like protein 2, chloroplastic-like [Cicer arietinum] gi|502176210|ref|XP_004515823.1| chr4 21339075 21344031 -
3 domain predictions
 –
Lj4g3v1748290.1
n.a. PREDICTED: uridine-cytidine kinase C-like [Glycine max] gi|356511573|ref|XP_003524499.1| chr4 25006409 25013607 +
2 domain predictions
 –
Lj5g3v0412360.1
n.a. PREDICTED: uridine kinase-like protein 4-like [Glycine max] gi|356527242|ref|XP_003532221.1| chr5 4137361 4143326 +
3 domain predictions
 –
Lj5g3v0412360.2
n.a. PREDICTED: uridine kinase-like protein 4-like [Glycine max] gi|356527242|ref|XP_003532221.1| chr5 4137361 4143783 +
3 domain predictions
 –
LotjaGi1g1v0013000.2
n.a. Uridine kinase; TAIR: AT4G26510.1 uridine kinase-like 4; Swiss-Prot: sp|O65583|UKL4_ARATH Uridine kinase-like protein 4; TrEMBL-Plants: tr|A0A0B2QUU5|A0A0B2QUU5_GLYSO Fructose-bisphosphate aldolase; Found in the gene: LotjaGi1g1v0013000 LjG1.1_chr1 1661643 1666511 -
2 domain predictions
 –
LotjaGi1g1v0013000.3
n.a. Uridine kinase; TAIR: AT4G26510.1 uridine kinase-like 4; Swiss-Prot: sp|O65583|UKL4_ARATH Uridine kinase-like protein 4; TrEMBL-Plants: tr|A0A0B2QUU5|A0A0B2QUU5_GLYSO Fructose-bisphosphate aldolase; Found in the gene: LotjaGi1g1v0013000 LjG1.1_chr1 1661643 1667145 -
3 domain predictions
 –
LotjaGi1g1v0622900.1
n.a. Uridine kinase; TAIR: AT5G40870.1 uridine kinase/uracil phosphoribosyltransferase 1; Swiss-Prot: sp|Q9FKS0|UKL1_ARATH Uridine kinase-like protein 1, chloroplastic; TrEMBL-Plants: tr|I1MLJ3|I1MLJ3_SOYBN Uridine kinase; Found in the gene: LotjaGi1g1v0622900 LjG1.1_chr1 117006876 117012928 -
3 domain predictions
 –
LotjaGi1g1v0622900.2
n.a. Uridine kinase; TAIR: AT5G40870.1 uridine kinase/uracil phosphoribosyltransferase 1; Swiss-Prot: sp|Q9FKS0|UKL1_ARATH Uridine kinase-like protein 1, chloroplastic; TrEMBL-Plants: tr|A0A0S3RWI8|A0A0S3RWI8_PHAAN Uridine kinase; Found in the gene: LotjaGi1g1v0622900 LjG1.1_chr1 117007433 117012669 -
2 domain predictions
 –
LotjaGi2g1v0075500.1
n.a. Uridine kinase; TAIR: AT3G27440.1 uridine kinase-like 5; Swiss-Prot: sp|Q9LTY6|UKL5_ARATH Uridine kinase-like protein 5; TrEMBL-Plants: tr|A0A1J7HJ27|A0A1J7HJ27_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0075500 LjG1.1_chr2 19759037 19770794 -
3 domain predictions
 –
LotjaGi4g1v0222600.1
n.a. Uridine kinase; TAIR: AT5G40870.1 uridine kinase/uracil phosphoribosyltransferase 1; Swiss-Prot: sp|Q9FKS0|UKL1_ARATH Uridine kinase-like protein 1, chloroplastic; TrEMBL-Plants: tr|I1MUP0|I1MUP0_SOYBN Uridine kinase; Found in the gene: LotjaGi4g1v0222600 LjG1.1_chr4 52763851 52768972 -
2 domain predictions
 –
LotjaGi6g1v0139200.1
n.a. Uridine kinase; TAIR: AT1G55810.1 uridine kinase-like 3; Swiss-Prot: sp|Q8VYB2|UKL3_ARATH Uridine kinase-like protein 3; TrEMBL-Plants: tr|V7BNR6|V7BNR6_PHAVU Uridine kinase; Found in the gene: LotjaGi6g1v0139200 LjG1.1_chr6 40438329 40445837 -
2 domain predictions
 –
LotjaGi6g1v0139200.2
n.a. Uridine kinase; TAIR: AT1G55810.1 uridine kinase-like 3; Swiss-Prot: sp|Q8VYB2|UKL3_ARATH Uridine kinase-like protein 3; TrEMBL-Plants: tr|V7BNR6|V7BNR6_PHAVU Uridine kinase; Found in the gene: LotjaGi6g1v0139200 LjG1.1_chr6 40438526 40445677 -
2 domain predictions
 –
LotjaGi6g1v0139200.3
n.a. Uridine kinase; TAIR: AT4G26510.1 uridine kinase-like 4; Swiss-Prot: sp|O65583|UKL4_ARATH Uridine kinase-like protein 4; TrEMBL-Plants: tr|I1KYV2|I1KYV2_SOYBN Uridine kinase; Found in the gene: LotjaGi6g1v0139200 LjG1.1_chr6 40438553 40445732 -
3 domain predictions
 –
LotjaGi6g1v0139200.4
n.a. Uridine kinase; TAIR: AT4G26510.1 uridine kinase-like 4; Swiss-Prot: sp|O65583|UKL4_ARATH Uridine kinase-like protein 4; TrEMBL-Plants: tr|V7BNR6|V7BNR6_PHAVU Uridine kinase; Found in the gene: LotjaGi6g1v0139200 LjG1.1_chr6 40439191 40444036 -
2 domain predictions
 –
LotjaGi6g1v0139200.5
n.a. Uridine kinase; TAIR: AT4G26510.1 uridine kinase-like 4; Swiss-Prot: sp|O65583|UKL4_ARATH Uridine kinase-like protein 4; TrEMBL-Plants: tr|I1KYV2|I1KYV2_SOYBN Uridine kinase; Found in the gene: LotjaGi6g1v0139200 LjG1.1_chr6 40439191 40444538 -
3 domain predictions
 –