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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0351219 |
| Transcript ID | Lj0g3v0351219.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: pentatricopeptide repeat-containing protein At1g12300, mitochondrial-like isoform X1 [Cicer arietinum] gi|502163014|ref|XP_004512696.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 27 | 533 | 507 | 1.20E-236 | – | |
| PANTHER | 27 | 533 | 507 | 1.20E-236 | – | |
| Gene3D | 29 | 180 | 152 | 3.00E-05 | ||
| SUPERFAMILY | 29 | 115 | 87 | 5.75E-05 | – | |
| ProSiteProfiles | 48 | 82 | 35 | 5.831 | ||
| ProSiteProfiles | 83 | 117 | 35 | 10.874 | ||
| Pfam | 83 | 130 | 48 | 6.30E-11 | ||
| TIGRFAM | 88 | 117 | 30 | 1.10E-05 | ||
| ProSiteProfiles | 118 | 152 | 35 | 9.525 | ||
| TIGRFAM | 120 | 153 | 34 | 3.10E-05 | ||
| Pfam | 148 | 179 | 32 | 6.10E-06 | ||
| ProSiteProfiles | 153 | 183 | 31 | 8.462 | ||
| Pfam | 183 | 212 | 30 | 6.90E-07 | ||
| ProSiteProfiles | 185 | 219 | 35 | 9.975 | ||
| TIGRFAM | 188 | 220 | 33 | 1.10E-06 | ||
| Pfam | 219 | 269 | 51 | 9.30E-17 | ||
| SUPERFAMILY | 219 | 315 | 97 | 5.75E-05 | – | |
| ProSiteProfiles | 220 | 254 | 35 | 11.038 | ||
| TIGRFAM | 222 | 257 | 36 | 1.50E-09 | ||
| Gene3D | 247 | 279 | 33 | 3.00E-05 | ||
| ProSiteProfiles | 256 | 290 | 35 | 12.573 | ||
| TIGRFAM | 259 | 291 | 33 | 3.70E-07 | ||
| Pfam | 287 | 304 | 18 | 2.10E-05 | ||
| ProSiteProfiles | 291 | 325 | 35 | 10.128 | ||
| TIGRFAM | 293 | 327 | 35 | 2.90E-05 | ||
| Pfam | 322 | 353 | 32 | 1.00E-11 | ||
| ProSiteProfiles | 326 | 360 | 35 | 12.584 | ||
| TIGRFAM | 329 | 362 | 34 | 1.00E-09 | ||
| Pfam | 358 | 388 | 31 | 1.10E-10 | ||
| ProSiteProfiles | 361 | 395 | 35 | 10.797 | ||
| TIGRFAM | 363 | 396 | 34 | 2.50E-07 | ||
| Pfam | 396 | 444 | 49 | 6.10E-13 | ||
| ProSiteProfiles | 396 | 430 | 35 | 9.328 | ||
| TIGRFAM | 399 | 431 | 33 | 0.0028 | ||
| ProSiteProfiles | 431 | 465 | 35 | 10.994 | ||
| TIGRFAM | 433 | 466 | 34 | 6.50E-04 | ||
| Pfam | 466 | 512 | 47 | 7.00E-11 | ||
| ProSiteProfiles | 466 | 500 | 35 | 13.428 | ||
| TIGRFAM | 469 | 502 | 34 | 9.20E-09 | ||
| ProSiteProfiles | 501 | 534 | 34 | 7.969 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj0g3v0351219.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0351219.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.