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Lj0g3v0358329.1

Overview

Field Value
Gene ID Lj0g3v0358329
Transcript ID Lj0g3v0358329.1
Related isoforms 1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: purple acid phosphatase 22-like [Cicer arietinum] gi|502111775|ref|XP_004494164.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Phobius
SIGNAL_PEPTIDE_N_REGION
1 53 53 – –
Phobius
SIGNAL_PEPTIDE
1 70 70 – –
PANTHER
PTHR22953:SF7
37 481 445 1.50E-304 –
PANTHER
PTHR22953
37 481 445 1.50E-304 –
Phobius
SIGNAL_PEPTIDE_H_REGION
54 64 11 – –
Phobius
SIGNAL_PEPTIDE_C_REGION
65 70 6 – –
Phobius
NON_CYTOPLASMIC_DOMAIN
71 487 417 – –
SUPERFAMILY
SSF49363
85 186 102 3.66E-29
IPR008963
Gene3D
G3DSA:2.60.40.380
96 187 92 1.70E-29
IPR015914
Pfam
PF16656
97 184 88 1.90E-21
IPR015914
Gene3D
G3DSA:3.60.21.10
190 467 278 1.80E-99
IPR029052
CDD
cd00839
190 467 278 1.13E-114 –
SUPERFAMILY
SSF56300
191 464 274 3.80E-58
IPR029052
Pfam
PF00149
193 383 191 1.40E-24
IPR004843
Pfam
PF14008
398 461 64 5.90E-16
IPR025733

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003993
Molecular function Acid phosphatase activity Catalysis of the reaction: an orthophosphoric monoester + H2O = an alcohol + phosphate, with an acid pH optimum.
Subterm of
GO:0016787
Molecular function Hydrolase activity Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
Subterm of
GO:0046872
Molecular function Metal ion binding Interacting selectively and non-covalently with any metal ion.
Subterm of

Genome browser

LORE1 insertions

No LORE1 insertions have been found in the genomic region that overlaps with this gene.

Expression data

Expression pattern

Expression pattern of Lj0g3v0358329.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj0g3v0358329.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.