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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0359989 |
| Transcript ID | Lj0g3v0359989.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: pentatricopeptide repeat-containing protein At3g22470, mitochondrial-like isoform X1 [Cicer arietinum] gi|502163179|ref|XP_004512752.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| ProSiteProfiles | 1 | 32 | 32 | 5.481 | ||
| PANTHER | 12 | 295 | 284 | 1.70E-149 | – | |
| Pfam | 12 | 46 | 35 | 2.60E-08 | ||
| ProSiteProfiles | 33 | 67 | 35 | 10.907 | ||
| TIGRFAM | 35 | 68 | 34 | 9.00E-06 | ||
| SUPERFAMILY | 49 | 267 | 219 | 1.10E-08 | – | |
| Pfam | 63 | 93 | 31 | 1.00E-10 | ||
| ProSiteProfiles | 68 | 102 | 35 | 11.203 | ||
| TIGRFAM | 70 | 104 | 35 | 2.20E-07 | ||
| Gene3D | 86 | 266 | 181 | 4.60E-07 | ||
| Pfam | 103 | 151 | 49 | 1.60E-18 | ||
| ProSiteProfiles | 103 | 137 | 35 | 13.285 | ||
| TIGRFAM | 106 | 139 | 34 | 5.00E-11 | ||
| ProSiteProfiles | 138 | 172 | 35 | 11.926 | ||
| TIGRFAM | 140 | 174 | 35 | 2.40E-07 | ||
| Pfam | 172 | 221 | 50 | 2.70E-21 | ||
| ProSiteProfiles | 173 | 207 | 35 | 13.756 | ||
| TIGRFAM | 175 | 209 | 35 | 1.10E-11 | ||
| ProSiteProfiles | 208 | 242 | 35 | 13.461 | ||
| TIGRFAM | 211 | 244 | 34 | 4.30E-10 | ||
| Pfam | 242 | 291 | 50 | 5.10E-17 | ||
| ProSiteProfiles | 243 | 277 | 35 | 11.926 | ||
| TIGRFAM | 245 | 271 | 27 | 1.10E-07 | ||
| ProSiteProfiles | 278 | 296 | 19 | 6.533 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj0g3v0359989.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0359989.1, powered by CORGI.
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