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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0359989 |
| Transcript ID | Lj0g3v0359989.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: pentatricopeptide repeat-containing protein At1g12300, mitochondrial-like [Glycine max] gi|356529489|ref|XP_003533323.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 474 | 474 | 2.30E-218 | – | |
| Pfam | 5 | 54 | 50 | 9.40E-09 | ||
| ProSiteProfiles | 6 | 40 | 35 | 8.309 | ||
| ProSiteProfiles | 41 | 75 | 35 | 8.539 | ||
| TIGRFAM | 43 | 76 | 34 | 8.30E-04 | ||
| Pfam | 71 | 100 | 30 | 7.40E-06 | ||
| ProSiteProfiles | 76 | 110 | 35 | 9.284 | ||
| TIGRFAM | 78 | 111 | 34 | 8.60E-05 | ||
| Pfam | 107 | 139 | 33 | 1.70E-10 | ||
| ProSiteProfiles | 111 | 145 | 35 | 11.751 | ||
| TIGRFAM | 113 | 146 | 34 | 1.20E-07 | ||
| Gene3D | 115 | 198 | 84 | 2.80E-08 | ||
| Pfam | 143 | 172 | 30 | 2.50E-09 | ||
| ProSiteProfiles | 146 | 180 | 35 | 10.95 | ||
| TIGRFAM | 148 | 182 | 35 | 9.10E-08 | ||
| Pfam | 180 | 229 | 50 | 5.50E-16 | ||
| ProSiteProfiles | 181 | 215 | 35 | 12.2 | ||
| TIGRFAM | 183 | 217 | 35 | 1.60E-06 | ||
| ProSiteProfiles | 216 | 250 | 35 | 10.907 | ||
| TIGRFAM | 218 | 251 | 34 | 1.70E-05 | ||
| Pfam | 246 | 276 | 31 | 1.90E-10 | ||
| ProSiteProfiles | 251 | 285 | 35 | 11.203 | ||
| TIGRFAM | 253 | 287 | 35 | 4.30E-07 | ||
| Pfam | 286 | 334 | 49 | 3.20E-18 | ||
| ProSiteProfiles | 286 | 320 | 35 | 13.285 | ||
| Gene3D | 289 | 450 | 162 | 2.80E-08 | ||
| SUPERFAMILY | 289 | 450 | 162 | 7.06E-07 | – | |
| TIGRFAM | 289 | 322 | 34 | 9.50E-11 | ||
| ProSiteProfiles | 321 | 355 | 35 | 11.926 | ||
| TIGRFAM | 323 | 357 | 35 | 4.50E-07 | ||
| Pfam | 355 | 404 | 50 | 5.40E-21 | ||
| ProSiteProfiles | 356 | 390 | 35 | 13.756 | ||
| TIGRFAM | 358 | 392 | 35 | 2.20E-11 | ||
| ProSiteProfiles | 391 | 425 | 35 | 13.461 | ||
| TIGRFAM | 394 | 427 | 34 | 8.20E-10 | ||
| Pfam | 425 | 474 | 50 | 1.00E-16 | ||
| ProSiteProfiles | 426 | 460 | 35 | 11.926 | ||
| TIGRFAM | 428 | 454 | 27 | 2.00E-07 | ||
| ProSiteProfiles | 461 | 479 | 19 | 6.533 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj0g3v0359989.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0359989.2, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.