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Lj0g3v0360099.2

Overview

Field Value
Gene ID Lj0g3v0360099
Transcript ID Lj0g3v0360099.2
Related isoforms 1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: disease resistance protein RPM1-like isoform X1 [Cicer arietinum] gi|502125327|ref|XP_004498891.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
CDD
cd14798
2 132 131 1.30E-28 –
PANTHER
PTHR23155
3 774 772 0 –
PANTHER
PTHR23155:SF592
3 774 772 0 –
Coils
Coil
113 133 21 – –
SUPERFAMILY
SSF52540
153 433 281 2.10E-69
IPR027417
Gene3D
G3DSA:3.40.50.300
174 315 142 1.50E-12
IPR027417
Pfam
PF00931
175 461 287 2.30E-76
IPR002182
PRINTS
PR00364
190 205 16 1.10E-17 –
PRINTS
PR00364
270 284 15 1.10E-17 –
PRINTS
PR00364
368 382 15 1.10E-17 –
SUPERFAMILY
SSF52058
498 888 391 1.14E-42
IPR032675
Gene3D
G3DSA:3.80.10.10
574 680 107 1.50E-15
IPR032675
Gene3D
G3DSA:3.80.10.10
681 757 77 4.90E-04
IPR032675
Gene3D
G3DSA:3.80.10.10
758 884 127 4.30E-10
IPR032675
PANTHER
PTHR23155:SF592
823 872 50 0 –
PANTHER
PTHR23155
823 872 50 0 –
PRINTS
PR00364
826 842 17 1.10E-17 –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0043531
Molecular function ADP binding Interacting selectively and non-covalently with ADP, adenosine 5'-diphosphate.
Subterm of

Genome browser

LORE1 insertions 16

Expression data

Expression pattern

Expression pattern of Lj0g3v0360099.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj0g3v0360099.2, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.