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| Field | Value |
|---|---|
| Gene ID | Lj1g3v0112880 |
| Transcript ID | Lj1g3v0112880.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: transmembrane emp24 domain-containing protein p24beta3-like [Cicer arietinum] gi|502119581|ref|XP_004496668.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 28 | 28 | – | – | |
| Phobius | 1 | 13 | 13 | – | – | |
| SignalP | 1 | 28 | 28 | – | – | |
| PANTHER | 11 | 215 | 205 | 3.00E-82 | ||
| PANTHER | 11 | 215 | 205 | 3.00E-82 | – | |
| Phobius | 14 | 24 | 11 | – | – | |
| Phobius | 25 | 28 | 4 | – | – | |
| SMART | 28 | 207 | 180 | 6.60E-54 | ||
| Phobius | 29 | 179 | 151 | – | – | |
| Pfam | 33 | 206 | 174 | 7.30E-43 | ||
| ProSiteProfiles | 36 | 123 | 88 | 16.313 | ||
| SUPERFAMILY | 43 | 132 | 90 | 5.49E-07 | ||
| Coils | 145 | 165 | 21 | – | – | |
| TMHMM | 180 | 202 | 23 | – | – | |
| Phobius | 180 | 202 | 23 | – | – | |
| Phobius | 203 | 215 | 13 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of Lj1g3v0112880.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v0112880.1, powered by CORGI.
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