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Lj1g3v0130130.1

Overview

Field Value
Gene ID Lj1g3v0130130
Transcript ID Lj1g3v0130130.1
Lotus japonicus genome version MG20 v3.0
Description transcription factor MYB103 [Lotus japonicus] gi|30024602|dbj|BAC75673.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR10641
1 150 150 1.60E-108 –
PANTHER
PTHR10641:SF671
1 150 150 1.60E-108 –
ProSiteProfiles
PS51294
9 61 53 15.769
IPR017930
SUPERFAMILY
SSF46689
11 108 98 2.71E-31
IPR009057
SMART
SM00717
13 63 51 4.20E-14
IPR001005
Pfam
PF00249
14 61 48 1.00E-16
IPR001005
Gene3D
G3DSA:1.10.10.60
15 68 54 3.10E-24
IPR009057
CDD
cd00167
16 61 46 2.03E-10 –
ProSiteProfiles
PS51294
62 116 55 26.938
IPR017930
SMART
SM00717
66 114 49 1.50E-15
IPR001005
Pfam
PF00249
67 112 46 9.00E-16
IPR001005
Gene3D
G3DSA:1.10.10.60
69 116 48 3.70E-27
IPR009057
CDD
cd00167
69 112 44 2.20E-11 –
PANTHER
PTHR10641
182 265 84 1.60E-108 –
PANTHER
PTHR10641:SF671
182 265 84 1.60E-108 –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003677
Molecular function DNA binding Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
Subterm of

Genome browser

LORE1 insertions 2

Expression data

Expression pattern

Expression pattern of Lj1g3v0130130.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj1g3v0130130.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.