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Lj1g3v0912020.1

Overview

Field Value
Gene ID Lj1g3v0912020
Transcript ID Lj1g3v0912020.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial-like [Glycine max] gi|356515957|ref|XP_003526663.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Phobius 1 35 35
Phobius 1 20 20
Phobius 21 30 10
Phobius 31 35 5
Phobius 36 482 447
PANTHER 68 482 415 1.60E-291
PANTHER 68 482 415 1.60E-291
Gene3D 79 463 385 3.70E-152
SUPERFAMILY 113 477 365 3.82E-109
CDD 143 435 293 5.63E-146
Pfam 146 442 297 2.50E-94

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor Catalysis of an oxidation-reduction (redox) reaction in which an aldehyde or ketone (oxo) group acts as a hydrogen or electron donor and reduces a disulfide.

LORE1 insertions 12

Expression data

Expression pattern

Expression pattern of Lj1g3v0912020.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj1g3v0912020.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.