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Lj1g3v0984180.1

Overview

Field Value
Gene ID Lj1g3v0984180
Transcript ID Lj1g3v0984180.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: probable pectinesterase/pectinesterase inhibitor 34-like [Cicer arietinum] gi|502136316|ref|XP_004502642.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
MobiDBLite
mobidb-lite
1 26 26 – –
Phobius
CYTOPLASMIC_DOMAIN
1 36 36 – –
PANTHER
PTHR31707
33 493 461 0 –
PANTHER
PTHR31707:SF8
33 493 461 0 –
TMHMM
TMhelix
37 59 23 – –
Phobius
TRANSMEMBRANE
37 58 22 – –
TIGRFAM
TIGR01614
48 220 173 4.60E-38
IPR006501
Phobius
NON_CYTOPLASMIC_DOMAIN
59 493 435 – –
SMART
SM00856
73 219 147 3.50E-42
IPR006501
Gene3D
G3DSA:1.20.140.40
75 220 146 8.90E-43
IPR006501
SUPERFAMILY
SSF101148
76 220 145 1.26E-36
IPR006501
Pfam
PF04043
77 219 143 7.90E-32
IPR006501
CDD
cd15798
82 221 140 6.12E-42 –
SUPERFAMILY
SSF51126
262 493 232 1.03E-78
IPR011050
Gene3D
G3DSA:2.160.20.10
263 493 231 6.70E-85
IPR012334
Pfam
PF01095
267 493 227 1.40E-109
IPR000070
ProSitePatterns
PS00503
413 422 10 –
IPR033131

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004857
Molecular function Enzyme inhibitor activity Binds to and stops, prevents or reduces the activity of an enzyme.
Subterm of
GO:0030599
Molecular function Pectinesterase activity Catalysis of the reaction: pectin + n H2O = n methanol + pectate.
Subterm of
GO:0042545
Biological process Cell wall modification The series of events leading to chemical and structural alterations of an existing cell wall that can result in loosening, increased extensibility or disassembly.
Subterm of

Genome browser

LORE1 insertions 3

Expression data

Expression pattern

Expression pattern of Lj1g3v0984180.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj1g3v0984180.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.