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Lj1g3v0985630.1

Overview

Field Value
Gene ID Lj1g3v0985630
Transcript ID Lj1g3v0985630.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: kinesin light chain 4-like isoform X2 [Cicer arietinum] gi|502136407|ref|XP_004502675.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Coils 94 114 21
PANTHER 100 476 377 4.20E-232
PANTHER 100 476 377 4.20E-232
Gene3D 113 287 175 2.90E-10
SMART 186 219 34 34
ProSiteProfiles 186 219 34 9.116
ProSiteProfiles 186 345 160 12.393
SUPERFAMILY 187 348 162 1.18E-15
Pfam 187 259 73 4.60E-08
ProSiteProfiles 228 261 34 5.487
SMART 228 261 34 75
ProSiteProfiles 270 303 34 6.726
SMART 270 303 34 11
Pfam 273 343 71 6.80E-11
Gene3D 288 371 84 4.10E-07
ProSiteProfiles 312 345 34 5.812
SMART 312 345 34 96
Pfam 357 427 71 5.20E-16
Gene3D 372 472 101 1.40E-10
SUPERFAMILY 380 427 48 1.18E-15
SMART 398 431 34 10
ProSiteProfiles 398 431 34 7.138
ProSiteProfiles 398 431 34 6.402
SMART 440 473 34 110
Pfam 444 476 33 9.40E-06

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).

LORE1 insertions 18

Expression data

Expression pattern

Expression pattern of Lj1g3v0985630.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj1g3v0985630.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.