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| Field | Value |
|---|---|
| Gene ID | Lj1g3v1233760 |
| Transcript ID | Lj1g3v1233760.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: RNA-binding protein 39-like isoform X2 [Cicer arietinum] gi|502136894|ref|XP_004502884.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 1 | 1 | – | – | |
| SignalP | 1 | 18 | 18 | – | – | |
| Phobius | 1 | 18 | 18 | – | – | |
| SignalP | 1 | 15 | 15 | – | – | |
| Phobius | 2 | 13 | 12 | – | – | |
| Phobius | 14 | 18 | 5 | – | – | |
| Pfam | 15 | 101 | 87 | 9.30E-18 | ||
| Phobius | 19 | 176 | 158 | – | – | |
| SUPERFAMILY | 81 | 166 | 86 | 2.85E-19 | ||
| CDD | 83 | 165 | 83 | 2.41E-40 | – | |
| Gene3D | 84 | 164 | 81 | 1.80E-21 | ||
| SMART | 85 | 163 | 79 | 1.60E-04 | ||
| PANTHER | 88 | 164 | 77 | 2.00E-16 | – | |
| PANTHER | 88 | 164 | 77 | 2.00E-16 | – | |
| Pfam | 107 | 160 | 54 | 1.20E-06 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleic acid binding | Interacting selectively and non-covalently with any nucleic acid. |
Expression pattern of Lj1g3v1233760.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v1233760.3, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.