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| Field | Value |
|---|---|
| Gene ID | Lj1g3v1363200 |
| Transcript ID | Lj1g3v1363200.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Octicosapeptide/Phox/Bem1p domain-containing protein [Medicago truncatula] gi|357464823|ref|XP_003602693.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 38 | 38 | – | – | |
| PANTHER | 3 | 309 | 307 | 7.50E-202 | – | |
| PANTHER | 3 | 309 | 307 | 7.50E-202 | – | |
| SUPERFAMILY | 36 | 153 | 118 | 6.44E-27 | – | |
| Gene3D | 37 | 155 | 119 | 3.60E-32 | – | |
| ProSiteProfiles | 43 | 101 | 59 | 10.308 | ||
| Pfam | 45 | 89 | 45 | 1.70E-06 | ||
| CDD | 45 | 157 | 113 | 1.87E-45 | – | |
| SMART | 46 | 94 | 49 | 1.50E-04 | ||
| Pfam | 105 | 149 | 45 | 3.10E-07 | ||
| ProSiteProfiles | 109 | 164 | 56 | 10.388 | ||
| SMART | 112 | 156 | 45 | 9.10E-04 | ||
| ProSiteProfiles | 205 | 268 | 64 | 8.632 | ||
| Gene3D | 207 | 309 | 103 | 1.50E-23 | – | |
| Pfam | 214 | 259 | 46 | 0.0012 | ||
| SMART | 214 | 261 | 48 | 0.03 | ||
| SUPERFAMILY | 214 | 310 | 97 | 5.18E-21 | – | |
| CDD | 214 | 309 | 96 | 4.46E-45 | – | |
| Pfam | 272 | 309 | 38 | 5.30E-05 | ||
| ProSiteProfiles | 276 | 310 | 35 | 9.433 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of Lj1g3v1363200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v1363200.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.