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| Field | Value |
|---|---|
| Gene ID | Lj1g3v1364450 |
| Transcript ID | Lj1g3v1364450.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine max] gi|356508920|ref|XP_003523201.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| ProSiteProfiles | 35 | 86 | 52 | 10.966 | ||
| PRINTS | 36 | 52 | 17 | 1.40E-23 | ||
| SUPERFAMILY | 39 | 335 | 297 | 5.93E-76 | ||
| Gene3D | 39 | 333 | 295 | 2.80E-80 | ||
| PANTHER | 40 | 418 | 379 | 1.10E-115 | – | |
| Pfam | 40 | 83 | 44 | 5.90E-09 | ||
| PRINTS | 70 | 83 | 14 | 1.40E-23 | ||
| Pfam | 86 | 135 | 50 | 5.30E-09 | ||
| ProSiteProfiles | 87 | 138 | 52 | 14.202 | ||
| PRINTS | 89 | 105 | 17 | 1.40E-23 | ||
| Pfam | 138 | 189 | 52 | 1.20E-12 | ||
| PRINTS | 139 | 155 | 17 | 1.40E-23 | ||
| ProSiteProfiles | 139 | 192 | 54 | 14.625 | ||
| PRINTS | 179 | 195 | 17 | 1.40E-23 | ||
| Pfam | 193 | 243 | 51 | 3.60E-06 | ||
| ProSiteProfiles | 193 | 253 | 61 | 10.725 | ||
| PRINTS | 195 | 209 | 15 | 1.40E-23 | ||
| ProSiteProfiles | 254 | 303 | 50 | 11.891 | ||
| SUPERFAMILY | 290 | 416 | 127 | 3.40E-21 | ||
| PRINTS | 293 | 311 | 19 | 1.40E-23 | ||
| Pfam | 303 | 353 | 51 | 2.30E-14 | ||
| ProSiteProfiles | 304 | 356 | 53 | 14.403 | ||
| PRINTS | 351 | 372 | 22 | 1.40E-23 | ||
| ProSiteProfiles | 356 | 419 | 64 | 10.765 | ||
| Gene3D | 373 | 416 | 44 | 1.20E-05 | ||
| Pfam | 374 | 416 | 43 | 5.10E-05 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of Lj1g3v1364450.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v1364450.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.