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| Field | Value |
|---|---|
| Gene ID | Lj1g3v1386390 |
| Transcript ID | Lj1g3v1386390.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: calcium-dependent protein kinase SK5-like [Cicer arietinum] gi|502137246|ref|XP_004503020.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 5 | 488 | 484 | 0 | – | |
| PANTHER | 5 | 488 | 484 | 0 | – | |
| Gene3D | 19 | 124 | 106 | 1.20E-31 | – | |
| CDD | 26 | 284 | 259 | 4.71E-137 | – | |
| SUPERFAMILY | 27 | 297 | 271 | 7.01E-87 | ||
| Pfam | 27 | 285 | 259 | 2.90E-78 | ||
| ProSiteProfiles | 27 | 285 | 259 | 49.121 | ||
| SMART | 27 | 285 | 259 | 1.90E-103 | ||
| ProSitePatterns | 33 | 56 | 24 | – | ||
| Gene3D | 125 | 308 | 184 | 1.50E-62 | – | |
| ProSitePatterns | 147 | 159 | 13 | – | ||
| Gene3D | 314 | 465 | 152 | 4.70E-46 | ||
| SUPERFAMILY | 325 | 464 | 140 | 2.27E-45 | ||
| ProSiteProfiles | 328 | 363 | 36 | 15.629 | ||
| SMART | 332 | 360 | 29 | 4.90E-07 | ||
| Pfam | 333 | 392 | 60 | 7.30E-10 | ||
| CDD | 333 | 392 | 60 | 3.72E-17 | ||
| ProSitePatterns | 341 | 353 | 13 | – | ||
| ProSiteProfiles | 364 | 399 | 36 | 11.417 | ||
| SMART | 368 | 396 | 29 | 6.90E-04 | ||
| ProSitePatterns | 377 | 389 | 13 | – | ||
| ProSiteProfiles | 400 | 435 | 36 | 14.988 | ||
| Pfam | 403 | 464 | 62 | 1.60E-10 | ||
| SMART | 404 | 432 | 29 | 0.0053 | ||
| CDD | 405 | 464 | 60 | 6.30E-15 | ||
| ProSitePatterns | 413 | 425 | 13 | – | ||
| ProSiteProfiles | 438 | 469 | 32 | 11.64 | ||
| SMART | 438 | 466 | 29 | 3.20E-04 | ||
| ProSitePatterns | 447 | 459 | 13 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | Calcium ion binding | Interacting selectively and non-covalently with calcium ions (Ca2+). | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of Lj1g3v1386390.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v1386390.1, powered by CORGI.
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