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Lj1g3v1442930.1

Overview

Field Value
Gene ID Lj1g3v1442930
Transcript ID Lj1g3v1442930.1
Related isoforms 1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: ADP-ribosylation factor GTPase-activating protein AGD1-like [Cicer arietinum] gi|502133396|ref|XP_004501749.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR23180
1 94 94 1.30E-178 –
PANTHER
PTHR23180:SF284
1 94 94 1.30E-178 –
Gene3D
G3DSA:2.30.29.30
48 193 146 4.70E-24
IPR011993
ProSiteProfiles
PS50003
54 191 138 17.229
IPR001849
SUPERFAMILY
SSF50729
54 195 142 8.30E-24
IPR011993
SMART
SM00233
55 193 139 2.60E-21
IPR001849
Pfam
PF00169
56 190 135 9.40E-14
IPR001849
CDD
cd13250
57 195 139 1.79E-37 –
PANTHER
PTHR23180:SF284
137 194 58 1.30E-178 –
PANTHER
PTHR23180
137 194 58 1.30E-178 –
MobiDBLite
mobidb-lite
228 249 22 – –
PANTHER
PTHR23180:SF284
251 347 97 1.30E-178 –
PANTHER
PTHR23180
251 347 97 1.30E-178 –
ProSiteProfiles
PS50115
255 388 134 25.64
IPR001164
SUPERFAMILY
SSF57863
255 350 96 3.27E-35 –
SMART
SM00105
255 378 124 1.10E-37
IPR001164
Pfam
PF01412
258 354 97 4.70E-32
IPR001164
PRINTS
PR00405
267 286 20 6.90E-16
IPR001164
PRINTS
PR00405
286 303 18 6.90E-16
IPR001164
PRINTS
PR00405
309 330 22 6.90E-16
IPR001164
PANTHER
PTHR23180
367 386 20 1.30E-178 –
PANTHER
PTHR23180:SF284
367 386 20 1.30E-178 –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0005096
Molecular function GTPase activator activity Binds to and increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP.
Subterm of

Genome browser

LORE1 insertions 9

Expression data

Expression pattern

Expression pattern of Lj1g3v1442930.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…

Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj1g3v1442930.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.