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| Field | Value |
|---|---|
| Gene ID | Lj1g3v1502550 |
| Transcript ID | Lj1g3v1502550.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Nodulin-like protein [Medicago truncatula] gi|357465041|ref|XP_003602802.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 15 | 15 | – | – | |
| PANTHER | 1 | 520 | 520 | 0 | – | |
| PANTHER | 1 | 520 | 520 | 0 | – | |
| SUPERFAMILY | 10 | 197 | 188 | 1.70E-10 | ||
| Pfam | 15 | 262 | 248 | 1.50E-86 | ||
| Phobius | 16 | 36 | 21 | – | – | |
| TMHMM | 16 | 38 | 23 | – | – | |
| Gene3D | 16 | 200 | 185 | 3.20E-10 | – | |
| Phobius | 37 | 81 | 45 | – | – | |
| TMHMM | 79 | 101 | 23 | – | – | |
| Phobius | 82 | 102 | 21 | – | – | |
| Phobius | 103 | 107 | 5 | – | – | |
| Phobius | 108 | 127 | 20 | – | – | |
| TMHMM | 108 | 130 | 23 | – | – | |
| Phobius | 128 | 147 | 20 | – | – | |
| TMHMM | 145 | 167 | 23 | – | – | |
| Phobius | 148 | 168 | 21 | – | – | |
| Phobius | 169 | 173 | 5 | – | – | |
| TMHMM | 174 | 195 | 22 | – | – | |
| Phobius | 174 | 194 | 21 | – | – | |
| Phobius | 195 | 213 | 19 | – | – | |
| SUPERFAMILY | 205 | 276 | 72 | 1.83E-20 | ||
| TMHMM | 210 | 232 | 23 | – | – | |
| Phobius | 214 | 236 | 23 | – | – | |
| Phobius | 237 | 241 | 5 | – | – | |
| Phobius | 242 | 267 | 26 | – | – | |
| TMHMM | 245 | 267 | 23 | – | – | |
| Phobius | 268 | 363 | 96 | – | – | |
| SUPERFAMILY | 345 | 516 | 172 | 1.83E-20 | ||
| Gene3D | 361 | 516 | 156 | 6.70E-14 | – | |
| Phobius | 364 | 385 | 22 | – | – | |
| TMHMM | 364 | 386 | 23 | – | – | |
| CDD | 364 | 516 | 153 | 3.87E-04 | ||
| Phobius | 386 | 396 | 11 | – | – | |
| Phobius | 397 | 419 | 23 | – | – | |
| TMHMM | 399 | 421 | 23 | – | – | |
| Phobius | 420 | 430 | 11 | – | – | |
| Phobius | 431 | 450 | 20 | – | – | |
| TMHMM | 431 | 453 | 23 | – | – | |
| Phobius | 451 | 455 | 5 | – | – | |
| Phobius | 456 | 478 | 23 | – | – | |
| TMHMM | 456 | 478 | 23 | – | – | |
| Phobius | 479 | 489 | 11 | – | – | |
| Phobius | 490 | 513 | 24 | – | – | |
| Phobius | 514 | 554 | 41 | – | – | |
| PANTHER | 537 | 588 | 52 | 0 | – | |
| PANTHER | 537 | 588 | 52 | 0 | – | |
| SUPERFAMILY | 552 | 582 | 31 | 1.83E-20 | ||
| TMHMM | 553 | 575 | 23 | – | – | |
| Gene3D | 554 | 579 | 26 | 6.70E-14 | – | |
| Phobius | 555 | 577 | 23 | – | – | |
| Phobius | 578 | 593 | 16 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. |
Expression pattern of Lj1g3v1502550.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v1502550.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.