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| Field | Value |
|---|---|
| Gene ID | Lj1g3v1548770 |
| Transcript ID | Lj1g3v1548770.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: serine/threonine-protein kinase CTR1-like [Glycine max] gi|356510128|ref|XP_003523792.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 32 | 59 | 28 | – | – | |
| Pfam | 219 | 427 | 209 | 2.20E-72 | – | |
| PANTHER | 302 | 445 | 144 | 0 | – | |
| PANTHER | 302 | 445 | 144 | 0 | – | |
| PANTHER | 499 | 904 | 406 | 0 | – | |
| PANTHER | 499 | 904 | 406 | 0 | – | |
| Gene3D | 621 | 706 | 86 | 1.30E-27 | – | |
| SUPERFAMILY | 622 | 898 | 277 | 5.53E-82 | ||
| Pfam | 644 | 898 | 255 | 2.30E-65 | ||
| ProSiteProfiles | 644 | 902 | 259 | 43.1 | ||
| SMART | 644 | 902 | 259 | 3.10E-55 | ||
| CDD | 650 | 898 | 249 | 1.29E-126 | – | |
| ProSitePatterns | 650 | 671 | 22 | – | ||
| Gene3D | 707 | 897 | 191 | 4.60E-55 | – | |
| PRINTS | 718 | 731 | 14 | 4.70E-11 | ||
| PRINTS | 759 | 777 | 19 | 4.70E-11 | ||
| ProSitePatterns | 765 | 777 | 13 | – | ||
| PRINTS | 825 | 847 | 23 | 4.70E-11 | ||
| PRINTS | 869 | 891 | 23 | 4.70E-11 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of Lj1g3v1548770.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v1548770.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.