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| Field | Value |
|---|---|
| Gene ID | Lj1g3v1698940 |
| Transcript ID | Lj1g3v1698940.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Natural resistance-associated macrophage protein [Medicago truncatula] gi|358345512|ref|XP_003636821.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 33 | 33 | – | – | |
| Phobius | 1 | 62 | 62 | – | – | |
| PANTHER | 4 | 31 | 28 | 0 | – | |
| PANTHER | 4 | 31 | 28 | 0 | ||
| Hamap | 49 | 488 | 440 | 36.06 | ||
| PANTHER | 56 | 529 | 474 | 0 | ||
| PANTHER | 56 | 529 | 474 | 0 | – | |
| TIGRFAM | 61 | 456 | 396 | 8.00E-124 | ||
| Phobius | 63 | 78 | 16 | – | – | |
| Phobius | 79 | 97 | 19 | – | – | |
| Pfam | 84 | 462 | 379 | 1.70E-112 | ||
| TMHMM | 97 | 119 | 23 | – | – | |
| Phobius | 98 | 120 | 23 | – | – | |
| Phobius | 121 | 139 | 19 | – | – | |
| Phobius | 140 | 167 | 28 | – | – | |
| TMHMM | 140 | 162 | 23 | – | – | |
| PRINTS | 142 | 168 | 27 | 4.70E-64 | ||
| Phobius | 168 | 172 | 5 | – | – | |
| PRINTS | 172 | 191 | 20 | 4.70E-64 | ||
| TMHMM | 172 | 191 | 20 | – | – | |
| Phobius | 173 | 191 | 19 | – | – | |
| Phobius | 192 | 202 | 11 | – | – | |
| PRINTS | 197 | 218 | 22 | 4.70E-64 | ||
| Phobius | 203 | 220 | 18 | – | – | |
| TMHMM | 203 | 220 | 18 | – | – | |
| Phobius | 221 | 258 | 38 | – | – | |
| TMHMM | 259 | 278 | 20 | – | – | |
| Phobius | 259 | 278 | 20 | – | – | |
| Phobius | 279 | 298 | 20 | – | – | |
| Phobius | 299 | 321 | 23 | – | – | |
| TMHMM | 299 | 321 | 23 | – | – | |
| Phobius | 322 | 358 | 37 | – | – | |
| TMHMM | 353 | 375 | 23 | – | – | |
| Phobius | 359 | 384 | 26 | – | – | |
| PRINTS | 370 | 389 | 20 | 4.70E-64 | ||
| Phobius | 385 | 395 | 11 | – | – | |
| Phobius | 396 | 417 | 22 | – | – | |
| TMHMM | 396 | 418 | 23 | – | – | |
| PRINTS | 398 | 415 | 18 | 4.70E-64 | ||
| Phobius | 418 | 436 | 19 | – | – | |
| PRINTS | 432 | 451 | 20 | 4.70E-64 | ||
| Phobius | 437 | 456 | 20 | – | – | |
| Phobius | 457 | 467 | 11 | – | – | |
| TMHMM | 467 | 489 | 23 | – | – | |
| Phobius | 468 | 489 | 22 | – | – | |
| Phobius | 490 | 494 | 5 | – | – | |
| Phobius | 495 | 516 | 22 | – | – | |
| TMHMM | 496 | 518 | 23 | – | – | |
| Phobius | 517 | 540 | 24 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Biological process | Metal ion transport | The directed movement of metal ions, any metal ion with an electric charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
| Molecular function | Metal ion transmembrane transporter activity | Enables the transfer of metal ions from one side of a membrane to the other. |
Expression pattern of Lj1g3v1698940.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v1698940.2, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.