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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR001046
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We have found 44 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 6.196s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj1g3v4590690.1
LjEin2a PREDICTED: ethylene-insensitive protein 2-like [Cicer arietinum] gi|502111178|ref|XP_004493976.1| chr1 54762167 54769698 +
4 domain predictions
3 GO terms
Lj5g3v0659810.1
LjEin2b PREDICTED: ethylene-insensitive protein 2-like [Glycine max] gi|356548291|ref|XP_003542536.1| chr5 9367685 9375375 -
4 domain predictions
3 GO terms
Lj0g3v0120889.1
n.a. PREDICTED: metal transporter Nramp6-like [Glycine max] gi|356550656|ref|XP_003543701.1| chr0 53785368 53791783 -
6 domain predictions
3 GO terms
Lj1g3v0862950.1
n.a. PREDICTED: metal transporter Nramp5-like [Glycine max] gi|356515921|ref|XP_003526645.1| chr1 11062087 11066709 -
6 domain predictions
3 GO terms
Lj1g3v0873000.1
n.a. PREDICTED: metal transporter Nramp5-like [Glycine max] gi|356515921|ref|XP_003526645.1| chr1 11089489 11090046 -
2 domain predictions
3 GO terms
Lj1g3v0873010.1
n.a. natural resistance-associated macrophage protein 1 [Arachis hypogaea] gi|402233826|gb|AFQ37304.1| chr1 11090510 11092934 -
4 domain predictions
3 GO terms
Lj1g3v1698940.1
n.a. PREDICTED: metal transporter Nramp2-like [Glycine max] gi|356510529|ref|XP_003523990.1| chr1 20144395 20149050 +
4 domain predictions
3 GO terms
Lj1g3v1698940.2
n.a. Natural resistance-associated macrophage protein [Medicago truncatula] gi|358345512|ref|XP_003636821.1| chr1 20144395 20149050 +
6 domain predictions
3 GO terms
Lj2g3v1925820.1
n.a. PREDICTED: metal transporter Nramp3-like [Glycine max] gi|356496941|ref|XP_003517323.1| chr2 28404314 28407335 +
6 domain predictions
3 GO terms
Lj3g3v0013380.1
n.a. PREDICTED: metal transporter Nramp6-like [Glycine max] gi|356550656|ref|XP_003543701.1| chr3 280551 285009 +
6 domain predictions
3 GO terms
Lj4g3v0783220.1
n.a. ferrous ion membrane transport protein DMT1 [Glycine max] gi|351722293|ref|NP_001236727.1| chr4 12372762 12375353 -
4 domain predictions
3 GO terms
Lj4g3v0783230.1
n.a. natural resistance associated macrophage protein 4.4 [Brassica juncea] gi|197941013|gb|ACH78243.1| chr4 12375716 12376500 -
4 domain predictions
3 GO terms
Lj4g3v0793240.1
n.a. ferrous ion membrane transport protein DMT1 [Glycine max] gi|351722293|ref|NP_001236727.1| chr4 12379700 12380074 -
3 domain predictions
3 GO terms
Lj4g3v0793250.1
n.a. ferrous ion membrane transport protein DMT1 [Glycine max] gi|351722293|ref|NP_001236727.1| chr4 12382630 12386999 -
3 domain predictions
3 GO terms
Lj4g3v0793310.1
n.a. metal transporter Nramp3 [Arabidopsis thaliana] gi|6468012|gb|AAF13278.1|AF202539_1 chr4 12397950 12398781 -
4 domain predictions
3 GO terms
Lj4g3v0793350.1
n.a. PREDICTED: metal transporter Nramp3-like [Glycine max] gi|356511925|ref|XP_003524672.1| chr4 12403284 12407142 -
6 domain predictions
3 GO terms
Lj4g3v1500410.1
n.a. Metal transporter [Medicago truncatula] gi|357463543|ref|XP_003602053.1| chr4 22698989 22702687 +
4 domain predictions
3 GO terms
Lj4g3v1500410.2
n.a. Metal transporter [Medicago truncatula] gi|357463543|ref|XP_003602053.1| chr4 22698989 22702687 +
6 domain predictions
3 GO terms
Lj5g3v1314630.1
n.a. ferrous ion membrane transport protein DMT1 [Glycine max] gi|351722293|ref|NP_001236727.1| chr5 20440821 20441969 +
4 domain predictions
3 GO terms
Lj6g3v2258850.1
n.a. PREDICTED: metal transporter Nramp3-like [Glycine max] gi|356496941|ref|XP_003517323.1| chr6 26226499 26229326 +
6 domain predictions
3 GO terms
LotjaGi1g1v0263400_LC.1
n.a. Metal transporter, putative; TAIR: AT1G80830.1 natural resistance-associated macrophage protein 1; Swiss-Prot: sp|Q0D7E4|NRAM1_ORYSJ Metal transporter Nramp1; TrEMBL-Plants: tr|I1KAC9|I1KAC9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0263400_LC LjG1.1_chr1 64520651 64523260 +
4 domain predictions
3 GO terms
LotjaGi1g1v0264200.1
n.a. Metal transporter, putative; TAIR: AT1G15960.1 NRAMP metal ion transporter 6; Swiss-Prot: sp|Q8H4H5|NRAM5_ORYSJ Metal transporter Nramp5; TrEMBL-Plants: tr|I1KAC9|I1KAC9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0264200 LjG1.1_chr1 64670921 64680542 -
6 domain predictions
3 GO terms
LotjaGi1g1v0264200.2
n.a. Metal transporter, putative; TAIR: AT1G15960.1 NRAMP metal ion transporter 6; Swiss-Prot: sp|Q8H4H5|NRAM5_ORYSJ Metal transporter Nramp5; TrEMBL-Plants: tr|J7ILM4|J7ILM4_ARAHY Natural resistance-associated macrophage protein 1; Found in the gene: LotjaGi1g1v0264200 LjG1.1_chr1 64676015 64676965 -
2 domain predictions
3 GO terms
LotjaGi1g1v0264500.1
n.a. Metal transporter, putative; TAIR: AT1G15960.1 NRAMP metal ion transporter 6; Swiss-Prot: sp|Q8H4H5|NRAM5_ORYSJ Metal transporter Nramp5; TrEMBL-Plants: tr|G7J4Z1|G7J4Z1_MEDTR NRAMP metal ion transporter 6; Found in the gene: LotjaGi1g1v0264500 LjG1.1_chr1 64711665 64719002 -
2 domain predictions
3 GO terms
LotjaGi1g1v0264500.2
n.a. Metal transporter, putative; TAIR: AT1G15960.1 NRAMP metal ion transporter 6; Swiss-Prot: sp|Q8H4H5|NRAM5_ORYSJ Metal transporter Nramp5; TrEMBL-Plants: tr|G7J4Z1|G7J4Z1_MEDTR NRAMP metal ion transporter 6; Found in the gene: LotjaGi1g1v0264500 LjG1.1_chr1 64711837 64717499 -
6 domain predictions
3 GO terms
LotjaGi1g1v0264500.3
n.a. Metal transporter, putative; TAIR: AT1G15960.1 NRAMP metal ion transporter 6; Swiss-Prot: sp|Q8H4H5|NRAM5_ORYSJ Metal transporter Nramp5; TrEMBL-Plants: tr|G7J4Z1|G7J4Z1_MEDTR NRAMP metal ion transporter 6; Found in the gene: LotjaGi1g1v0264500 LjG1.1_chr1 64712108 64717023 -
6 domain predictions
3 GO terms
LotjaGi1g1v0359400.1
n.a. Metal transporter; TAIR: AT1G47240.1 NRAMP metal ion transporter 2; Swiss-Prot: sp|Q9C6B2|NRAM2_ARATH Metal transporter Nramp2; TrEMBL-Plants: tr|V7ASV1|V7ASV1_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0359400 LjG1.1_chr1 83411934 83417546 +
6 domain predictions
3 GO terms
LotjaGi1g1v0359400.2
n.a. Metal transporter; TAIR: AT1G47240.1 NRAMP metal ion transporter 2; Swiss-Prot: sp|Q9C6B2|NRAM2_ARATH Metal transporter Nramp2; TrEMBL-Plants: tr|V7ASV1|V7ASV1_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0359400 LjG1.1_chr1 83412149 83414730 +
6 domain predictions
3 GO terms
LotjaGi1g1v0690600.1
n.a. Divalent metal cation transporter MntH 2; TAIR: AT5G03280.1 NRAMP metal ion transporter family protein; Swiss-Prot: sp|Q9S814|EIN2_ARATH Ethylene-insensitive protein 2; TrEMBL-Plants: tr|A0A0D5W3E1|A0A0D5W3E1_PEA Ethylene insensitive 2; Found in the gene: LotjaGi1g1v0690600 LjG1.1_chr1 125837947 125846096 -
4 domain predictions
3 GO terms
LotjaGi1g1v0690600.2
n.a. Divalent metal cation transporter MntH 2; TAIR: AT5G03280.1 NRAMP metal ion transporter family protein; Swiss-Prot: sp|Q9S814|EIN2_ARATH Ethylene-insensitive protein 2; TrEMBL-Plants: tr|A0A0D5W3E1|A0A0D5W3E1_PEA Ethylene insensitive 2; Found in the gene: LotjaGi1g1v0690600 LjG1.1_chr1 125838011 125845985 -
4 domain predictions
3 GO terms
LotjaGi2g1v0406100.1
n.a. Metal transporter; TAIR: AT2G23150.1 natural resistance-associated macrophage protein 3; Swiss-Prot: sp|Q9SNV9|NRAM3_ARATH Metal transporter Nramp3; TrEMBL-Plants: tr|I1J9B4|I1J9B4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0406100 LjG1.1_chr2 90314071 90316910 +
6 domain predictions
3 GO terms
LotjaGi3g1v0004400.1
n.a. Metal transporter, putative; TAIR: AT1G15960.1 NRAMP metal ion transporter 6; Swiss-Prot: sp|Q9S9N8|NRAM6_ARATH Metal transporter Nramp6; TrEMBL-Plants: tr|A0A151S6L4|A0A151S6L4_CAJCA Metal transporter Nramp6; Found in the gene: LotjaGi3g1v0004400 LjG1.1_chr3 582019 588868 +
6 domain predictions
3 GO terms
LotjaGi3g1v0004400.2
n.a. Metal transporter, putative; TAIR: AT1G15960.1 NRAMP metal ion transporter 6; Swiss-Prot: sp|Q9S9N8|NRAM6_ARATH Metal transporter Nramp6; TrEMBL-Plants: tr|A0A151S6L4|A0A151S6L4_CAJCA Metal transporter Nramp6; Found in the gene: LotjaGi3g1v0004400 LjG1.1_chr3 582024 588817 +
6 domain predictions
3 GO terms
LotjaGi3g1v0004400.3
n.a. Metal transporter, putative; TAIR: AT1G15960.1 NRAMP metal ion transporter 6; Swiss-Prot: sp|Q9S9N8|NRAM6_ARATH Metal transporter Nramp6; TrEMBL-Plants: tr|A0A151S6L4|A0A151S6L4_CAJCA Metal transporter Nramp6; Found in the gene: LotjaGi3g1v0004400 LjG1.1_chr3 583604 588397 +
6 domain predictions
3 GO terms
LotjaGi3g1v0004400.4
n.a. Metal transporter, putative; TAIR: AT1G15960.1 NRAMP metal ion transporter 6; Swiss-Prot: sp|Q9S9N8|NRAM6_ARATH Metal transporter Nramp6; TrEMBL-Plants: tr|A0A151S6L4|A0A151S6L4_CAJCA Metal transporter Nramp6; Found in the gene: LotjaGi3g1v0004400 LjG1.1_chr3 583785 588397 +
6 domain predictions
3 GO terms
LotjaGi3g1v0392000.2
n.a. Metal transporter; TAIR: AT1G47240.1 NRAMP metal ion transporter 2; Swiss-Prot: sp|Q9C6B2|NRAM2_ARATH Metal transporter Nramp2; TrEMBL-Plants: tr|K7KZX0|K7KZX0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0392000 LjG1.1_chr3 79053211 79055669 -
6 domain predictions
3 GO terms
LotjaGi3g1v0392000.3
n.a. Metal transporter; TAIR: AT1G47240.1 NRAMP metal ion transporter 2; Swiss-Prot: sp|Q9C6B2|NRAM2_ARATH Metal transporter Nramp2; TrEMBL-Plants: tr|K7KZX0|K7KZX0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0392000 LjG1.1_chr3 79053767 79055669 -
6 domain predictions
3 GO terms
LotjaGi4g1v0098600_LC.1
n.a. Metal transporter; TAIR: AT2G23150.1 natural resistance-associated macrophage protein 3; Swiss-Prot: sp|Q9SNV9|NRAM3_ARATH Metal transporter Nramp3; TrEMBL-Plants: tr|A0A0B2SBC3|A0A0B2SBC3_GLYSO Metal transporter Nramp3; Found in the gene: LotjaGi4g1v0098600_LC LjG1.1_chr4 13324838 13327380 -
4 domain predictions
3 GO terms
LotjaGi4g1v0098600_LC.2
n.a. Metal transporter; TAIR: AT2G23150.1 natural resistance-associated macrophage protein 3; Swiss-Prot: sp|Q9SNV9|NRAM3_ARATH Metal transporter Nramp3; TrEMBL-Plants: tr|A0A0B2SBC3|A0A0B2SBC3_GLYSO Metal transporter Nramp3; Found in the gene: LotjaGi4g1v0098600_LC LjG1.1_chr4 13324838 13327538 -
4 domain predictions
3 GO terms
LotjaGi4g1v0098600_LC.3
n.a. Metal transporter; TAIR: AT2G23150.1 natural resistance-associated macrophage protein 3; Swiss-Prot: sp|Q9SNV9|NRAM3_ARATH Metal transporter Nramp3; TrEMBL-Plants: tr|I1K299|I1K299_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0098600_LC LjG1.1_chr4 13324883 13328617 -
5 domain predictions
3 GO terms
LotjaGi4g1v0098700.1
n.a. Metal transporter; TAIR: AT2G23150.1 natural resistance-associated macrophage protein 3; Swiss-Prot: sp|Q9SNV9|NRAM3_ARATH Metal transporter Nramp3; TrEMBL-Plants: tr|I1K299|I1K299_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0098700 LjG1.1_chr4 13336057 13358618 -
6 domain predictions
3 GO terms
LotjaGi4g1v0098700.2
n.a. Metal transporter; TAIR: AT2G23150.1 natural resistance-associated macrophage protein 3; Swiss-Prot: sp|Q9SNV9|NRAM3_ARATH Metal transporter Nramp3; TrEMBL-Plants: tr|I1K299|I1K299_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0098700 LjG1.1_chr4 13354620 13358652 -
6 domain predictions
3 GO terms
LotjaGi4g1v0234500.1
n.a. Metal transporter, putative; TAIR: AT1G15960.1 NRAMP metal ion transporter 6; Swiss-Prot: sp|Q8H4H5|NRAM5_ORYSJ Metal transporter Nramp5; TrEMBL-Plants: tr|G7J4Z1|G7J4Z1_MEDTR NRAMP metal ion transporter 6; Found in the gene: LotjaGi4g1v0234500 LjG1.1_chr4 54853699 54860573 +
6 domain predictions
3 GO terms
LotjaGi5g1v0079800.1
n.a. Divalent metal cation transporter MntH 2; TAIR: AT5G03280.1 NRAMP metal ion transporter family protein; Swiss-Prot: sp|Q9S814|EIN2_ARATH Ethylene-insensitive protein 2; TrEMBL-Plants: tr|K7LZS3|K7LZS3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0079800 LjG1.1_chr5 12966153 12974640 +
4 domain predictions
3 GO terms