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| Field | Value |
|---|---|
| Gene ID | Lj1g3v1732290 |
| Transcript ID | Lj1g3v1732290.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: tetratricopeptide repeat protein 7B-like [Glycine max] gi|356509775|ref|XP_003523621.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 8 | 36 | 29 | – | – | |
| PANTHER | 32 | 708 | 677 | 0 | – | |
| PANTHER | 32 | 708 | 677 | 0 | – | |
| SUPERFAMILY | 46 | 88 | 43 | 4.68E-06 | ||
| Gene3D | 46 | 89 | 44 | 1.30E-06 | ||
| Coils | 57 | 77 | 21 | – | – | |
| Gene3D | 154 | 222 | 69 | 1.30E-06 | ||
| SUPERFAMILY | 200 | 218 | 19 | 1.05E-08 | ||
| SUPERFAMILY | 202 | 243 | 42 | 4.68E-06 | ||
| SUPERFAMILY | 291 | 344 | 54 | 4.68E-06 | ||
| ProSiteProfiles | 319 | 352 | 34 | 6.136 | ||
| SMART | 319 | 352 | 34 | 20 | ||
| Gene3D | 320 | 333 | 14 | 1.30E-06 | ||
| SUPERFAMILY | 321 | 358 | 38 | 1.05E-08 | ||
| Gene3D | 334 | 350 | 17 | 2.90E-26 | ||
| Gene3D | 475 | 708 | 234 | 2.90E-26 | ||
| SUPERFAMILY | 483 | 603 | 121 | 1.05E-08 | ||
| SMART | 513 | 546 | 34 | 150 | ||
| SUPERFAMILY | 551 | 708 | 158 | 3.19E-16 | ||
| ProSiteProfiles | 574 | 607 | 34 | 5.163 | ||
| ProSiteProfiles | 574 | 711 | 138 | 19.602 | ||
| SMART | 574 | 607 | 34 | 180 | ||
| SMART | 608 | 641 | 34 | 100 | ||
| ProSiteProfiles | 608 | 641 | 34 | 7.552 | ||
| Pfam | 670 | 706 | 37 | 0.012 | – | |
| SMART | 678 | 711 | 34 | 7.6 | ||
| ProSiteProfiles | 678 | 711 | 34 | 8.703 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj1g3v1732290.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v1732290.1, powered by CORGI.
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