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| Field | Value |
|---|---|
| Gene ID | Lj1g3v2012980 |
| Transcript ID | Lj1g3v2012980.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Nucleotide binding site leucine-rich repeat disease resistance protein [Medicago truncatula] gi|357463129|ref|XP_003601846.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 531 | 531 | 3.70E-192 | – | |
| PANTHER | 1 | 531 | 531 | 3.70E-192 | – | |
| SUPERFAMILY | 4 | 192 | 189 | 1.38E-37 | ||
| Gene3D | 14 | 114 | 101 | 9.50E-07 | ||
| Pfam | 21 | 218 | 198 | 4.40E-39 | ||
| PRINTS | 32 | 46 | 15 | 7.70E-10 | – | |
| PRINTS | 130 | 144 | 15 | 7.70E-10 | – | |
| SUPERFAMILY | 255 | 446 | 192 | 4.51E-31 | ||
| Gene3D | 328 | 451 | 124 | 1.40E-19 | ||
| SUPERFAMILY | 475 | 634 | 160 | 4.51E-31 | ||
| Gene3D | 526 | 628 | 103 | 1.40E-19 | ||
| SUPERFAMILY | 621 | 845 | 225 | 1.56E-26 | ||
| Gene3D | 629 | 843 | 215 | 1.40E-24 | ||
| PRINTS | 685 | 701 | 17 | 7.70E-10 | – | |
| PANTHER | 782 | 831 | 50 | 3.70E-192 | – | |
| PANTHER | 782 | 831 | 50 | 3.70E-192 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ADP binding | Interacting selectively and non-covalently with ADP, adenosine 5'-diphosphate. |
Expression pattern of Lj1g3v2012980.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v2012980.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.