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Lj1g3v2012990.1

Overview

Field Value
Gene ID Lj1g3v2012990
Transcript ID Lj1g3v2012990.1
Related isoforms 1
Lotus japonicus genome version MG20 v3.0
Description
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
CDD 2 118 117 8.49E-08
PANTHER 3 746 744 5.00E-280
PANTHER 3 746 744 5.00E-280
SUPERFAMILY 133 407 275 5.07E-64
Gene3D 150 329 180 2.10E-17
Pfam 152 433 282 1.20E-57
PRINTS 174 189 16 5.60E-17
PRINTS 247 261 15 5.60E-17
PRINTS 345 359 15 5.60E-17
SUPERFAMILY 470 661 192 6.89E-31
Gene3D 541 674 134 2.10E-20
SUPERFAMILY 690 848 159 6.89E-31
Gene3D 742 849 108 2.10E-20
SUPERFAMILY 836 1060 225 2.18E-26
Gene3D 850 1058 209 2.10E-24
PRINTS 900 916 17 5.60E-17
PANTHER 997 1046 50 5.00E-280
PANTHER 997 1046 50 5.00E-280

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function ADP binding Interacting selectively and non-covalently with ADP, adenosine 5'-diphosphate.

Expression data

Expression pattern

Expression pattern of Lj1g3v2012990.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj1g3v2012990.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.