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| Field | Value |
|---|---|
| Gene ID | Lj1g3v2035170 |
| Transcript ID | Lj1g3v2035170.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma cacao] gi|508782386|gb|EOY29642.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| ProSiteProfiles | 3 | 37 | 35 | 5.294 | ||
| PANTHER | 25 | 550 | 526 | 6.80E-297 | – | |
| PANTHER | 25 | 550 | 526 | 6.80E-297 | – | |
| ProSiteProfiles | 38 | 72 | 35 | 9.668 | ||
| TIGRFAM | 45 | 71 | 27 | 0.0021 | ||
| Pfam | 69 | 114 | 46 | 8.30E-08 | ||
| TIGRFAM | 71 | 104 | 34 | 0.0019 | ||
| ProSiteProfiles | 73 | 103 | 31 | 6.051 | ||
| ProSiteProfiles | 139 | 169 | 31 | 7.815 | ||
| TIGRFAM | 144 | 170 | 27 | 8.30E-04 | ||
| Pfam | 170 | 216 | 47 | 3.90E-15 | ||
| ProSiteProfiles | 170 | 204 | 35 | 11.455 | ||
| TIGRFAM | 172 | 206 | 35 | 1.30E-07 | ||
| ProSiteProfiles | 205 | 239 | 35 | 8.089 | ||
| ProSiteProfiles | 242 | 276 | 35 | 7.629 | ||
| Gene3D | 246 | 307 | 62 | 7.50E-05 | ||
| Pfam | 248 | 274 | 27 | 0.12 | ||
| Pfam | 276 | 302 | 27 | 0.18 | ||
| ProSiteProfiles | 342 | 372 | 31 | 7.859 | ||
| TIGRFAM | 347 | 375 | 29 | 0.0016 | ||
| Pfam | 372 | 420 | 49 | 1.60E-12 | ||
| ProSiteProfiles | 373 | 407 | 35 | 11.762 | ||
| TIGRFAM | 375 | 409 | 35 | 1.70E-08 | ||
| ProSiteProfiles | 408 | 443 | 36 | 7.728 | ||
| ProSiteProfiles | 444 | 474 | 31 | 7.421 | ||
| Pfam | 448 | 472 | 25 | 0.13 | ||
| ProSiteProfiles | 476 | 506 | 31 | 5.086 | ||
| Gene3D | 478 | 532 | 55 | 7.50E-05 | ||
| ProSiteProfiles | 510 | 544 | 35 | 7.224 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj1g3v2035170.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v2035170.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.