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| Field | Value |
|---|---|
| Gene ID | Lj1g3v2036730 |
| Transcript ID | Lj1g3v2036730.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: signal peptide peptidase-like [Cicer arietinum] gi|502131994|ref|XP_004501187.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 6 | 6 | – | – | |
| TMHMM | 7 | 24 | 18 | – | – | |
| Phobius | 7 | 22 | 16 | – | – | |
| PANTHER | 12 | 334 | 323 | 6.00E-152 | ||
| Phobius | 23 | 27 | 5 | – | – | |
| Phobius | 28 | 43 | 16 | – | – | |
| Phobius | 44 | 62 | 19 | – | – | |
| SMART | 51 | 310 | 260 | 3.80E-89 | ||
| Pfam | 51 | 322 | 272 | 1.30E-89 | ||
| TMHMM | 59 | 78 | 20 | – | – | |
| Phobius | 63 | 81 | 19 | – | – | |
| Phobius | 82 | 92 | 11 | – | – | |
| TMHMM | 85 | 107 | 23 | – | – | |
| Phobius | 93 | 114 | 22 | – | – | |
| Phobius | 115 | 134 | 20 | – | – | |
| Phobius | 135 | 156 | 22 | – | – | |
| Phobius | 157 | 161 | 5 | – | – | |
| TMHMM | 161 | 183 | 23 | – | – | |
| Phobius | 162 | 181 | 20 | – | – | |
| Phobius | 182 | 187 | 6 | – | – | |
| Phobius | 188 | 212 | 25 | – | – | |
| TMHMM | 190 | 212 | 23 | – | – | |
| Phobius | 213 | 231 | 19 | – | – | |
| TMHMM | 232 | 251 | 20 | – | – | |
| Phobius | 232 | 251 | 20 | – | – | |
| Phobius | 252 | 262 | 11 | – | – | |
| Phobius | 263 | 285 | 23 | – | – | |
| TMHMM | 263 | 285 | 23 | – | – | |
| Phobius | 286 | 290 | 5 | – | – | |
| TMHMM | 290 | 309 | 20 | – | – | |
| Phobius | 291 | 309 | 19 | – | – | |
| Phobius | 310 | 341 | 32 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Aspartic-type endopeptidase activity | Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which a water molecule bound by the side chains of aspartic residues at the active center acts as a nucleophile. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
Expression pattern of Lj1g3v2036730.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v2036730.1, powered by CORGI.
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