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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR007369
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 24 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.612s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0281099.1
n.a. PREDICTED: signal peptide peptidase-like 2B-like [Glycine max] gi|356568398|ref|XP_003552398.1| chr0 145737865 145746808 -
3 domain predictions
2 GO terms
Lj0g3v0323379.1
n.a. PREDICTED: signal peptide peptidase-like 2B-like [Glycine max] gi|356497238|ref|XP_003517469.1| chr0 168871173 168876311 +
3 domain predictions
2 GO terms
Lj1g3v2036730.1
n.a. PREDICTED: signal peptide peptidase-like [Cicer arietinum] gi|502131994|ref|XP_004501187.1| chr1 24082021 24088234 -
3 domain predictions
2 GO terms
Lj1g3v3329680.1
n.a. PREDICTED: signal peptide peptidase-like 2B-like [Glycine max] gi|356527443|ref|XP_003532320.1| chr1 37768829 37777482 +
3 domain predictions
2 GO terms
Lj3g3v1619370.1
n.a. PREDICTED: signal peptide peptidase-like 2B-like [Glycine max] gi|356497238|ref|XP_003517469.1| chr3 20540024 20541502 -
2 domain predictions
2 GO terms
Lj3g3v2340910.1
n.a. PREDICTED: signal peptide peptidase-like 4-like isoform X1 [Cicer arietinum] gi|502157171|ref|XP_004510782.1| chr3 29380751 29390251 +
3 domain predictions
2 GO terms
Lj5g3v1999270.1
n.a. PREDICTED: signal peptide peptidase-like 3-like [Glycine max] gi|356575974|ref|XP_003556110.1| chr5 28158910 28163025 -
3 domain predictions
2 GO terms
Lj5g3v2302910.1
n.a. PREDICTED: signal peptide peptidase-like 5-like isoform X1 [Cicer arietinum] gi|502121709|ref|XP_004497418.1| chr5 34105526 34112112 +
3 domain predictions
2 GO terms
Lj5g3v2302910.2
n.a. PREDICTED: signal peptide peptidase-like 5-like isoform X1 [Cicer arietinum] gi|502121709|ref|XP_004497418.1| chr5 34108301 34112112 +
3 domain predictions
2 GO terms
LotjaGi1g1v0399600.1
n.a. Signal peptide peptidase-like protein; TAIR: AT2G03120.1 signal peptide peptidase; Swiss-Prot: sp|O81062|SIP_ARATH Signal peptide peptidase; TrEMBL-Plants: tr|I3S2E3|I3S2E3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0399600 LjG1.1_chr1 88670078 88676231 +
3 domain predictions
2 GO terms
LotjaGi1g1v0399600.2
n.a. Signal peptide peptidase-like protein; TAIR: AT2G03120.1 signal peptide peptidase; Swiss-Prot: sp|O81062|SIP_ARATH Signal peptide peptidase; TrEMBL-Plants: tr|I3T5V7|I3T5V7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0399600 LjG1.1_chr1 88670975 88675479 +
3 domain predictions
2 GO terms
LotjaGi1g1v0399600.3
n.a. Signal peptide peptidase-like protein; TAIR: AT2G03120.1 signal peptide peptidase; Swiss-Prot: sp|O81062|SIP_ARATH Signal peptide peptidase; TrEMBL-Plants: tr|I3T5V7|I3T5V7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0399600 LjG1.1_chr1 88670980 88675510 +
3 domain predictions
2 GO terms
LotjaGi1g1v0399600.4
n.a. Signal peptide peptidase-like protein; TAIR: AT2G03120.1 signal peptide peptidase; Swiss-Prot: sp|O81062|SIP_ARATH Signal peptide peptidase; TrEMBL-Plants: tr|I3S2E3|I3S2E3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0399600 LjG1.1_chr1 88670980 88675749 +
3 domain predictions
2 GO terms
LotjaGi1g1v0399600.5
n.a. Signal peptide peptidase-like protein; TAIR: AT2G03120.1 signal peptide peptidase; Swiss-Prot: sp|O81062|SIP_ARATH Signal peptide peptidase; TrEMBL-Plants: tr|I3S2E3|I3S2E3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0399600 LjG1.1_chr1 88670980 88675749 +
3 domain predictions
2 GO terms
LotjaGi1g1v0477200.1
n.a. Signal peptide peptidase-like protein; TAIR: AT1G01650.1 SIGNAL PEPTIDE PEPTIDASE-LIKE 4; Swiss-Prot: sp|Q0WMJ8|SIPL4_ARATH Signal peptide peptidase-like 4; TrEMBL-Plants: tr|A0A0B2NQL8|A0A0B2NQL8_GLYSO Signal peptide peptidase-like 2B; Found in the gene: LotjaGi1g1v0477200 LjG1.1_chr1 98889371 98899025 +
3 domain predictions
2 GO terms
LotjaGi1g1v0554700.1
n.a. Signal peptide peptidase-like protein; TAIR: AT1G05820.1 SIGNAL PEPTIDE PEPTIDASE-LIKE 5; Swiss-Prot: sp|Q9MA44|SIPL5_ARATH Signal peptide peptidase-like 5; TrEMBL-Plants: tr|V7AZT9|V7AZT9_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0554700 LjG1.1_chr1 108685266 108694704 +
3 domain predictions
2 GO terms
LotjaGi2g1v0158900.1
n.a. Signal peptide peptidase-like protein; TAIR: AT1G63690.1 SIGNAL PEPTIDE PEPTIDASE-LIKE 2; Swiss-Prot: sp|Q8W469|SIPL2_ARATH Signal peptide peptidase-like 2; TrEMBL-Plants: tr|A0A0B2QVP2|A0A0B2QVP2_GLYSO Signal peptide peptidase-like 2B; Found in the gene: LotjaGi2g1v0158900 LjG1.1_chr2 55990274 55997513 +
3 domain predictions
2 GO terms
LotjaGi3g1v0384000.1
n.a. Signal peptide peptidase-like protein; TAIR: AT1G01650.1 SIGNAL PEPTIDE PEPTIDASE-LIKE 4; Swiss-Prot: sp|Q0WMJ8|SIPL4_ARATH Signal peptide peptidase-like 4; TrEMBL-Plants: tr|G7LBR2|G7LBR2_MEDTR Signal peptide peptidase-like protein; Found in the gene: LotjaGi3g1v0384000 LjG1.1_chr3 77835245 77845627 +
3 domain predictions
2 GO terms
LotjaGi3g1v0384000.2
n.a. Signal peptide peptidase-like protein; TAIR: AT1G01650.1 SIGNAL PEPTIDE PEPTIDASE-LIKE 4; Swiss-Prot: sp|Q0WMJ8|SIPL4_ARATH Signal peptide peptidase-like 4; TrEMBL-Plants: tr|I1KI95|I1KI95_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0384000 LjG1.1_chr3 77835567 77844802 +
3 domain predictions
2 GO terms
LotjaGi3g1v0384000.3
n.a. Signal peptide peptidase-like protein; TAIR: AT1G01650.1 SIGNAL PEPTIDE PEPTIDASE-LIKE 4; Swiss-Prot: sp|Q0WMJ8|SIPL4_ARATH Signal peptide peptidase-like 4; TrEMBL-Plants: tr|I1KI95|I1KI95_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0384000 LjG1.1_chr3 77836686 77844802 +
3 domain predictions
2 GO terms
LotjaGi3g1v0384000.4
n.a. Signal peptide peptidase-like protein; TAIR: AT1G63690.1 SIGNAL PEPTIDE PEPTIDASE-LIKE 2; Swiss-Prot: sp|Q8W469|SIPL2_ARATH Signal peptide peptidase-like 2; TrEMBL-Plants: tr|I1JK76|I1JK76_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0384000 LjG1.1_chr3 77837505 77844802 +
3 domain predictions
2 GO terms
LotjaGi5g1v0299500.1
n.a. Signal peptide peptidase-like protein; TAIR: AT4G33410.1 SIGNAL PEPTIDE PEPTIDASE-LIKE 1; Swiss-Prot: sp|Q93Z32|SIPL1_ARATH Signal peptide peptidase-like 1; TrEMBL-Plants: tr|A0A0L9TZP0|A0A0L9TZP0_PHAAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0299500 LjG1.1_chr5 61594544 61599250 -
3 domain predictions
2 GO terms
LotjaGi5g1v0299500.2
n.a. Signal peptide peptidase-like protein; TAIR: AT4G33410.1 SIGNAL PEPTIDE PEPTIDASE-LIKE 1; Swiss-Prot: sp|Q93Z32|SIPL1_ARATH Signal peptide peptidase-like 1; TrEMBL-Plants: tr|A0A0L9TZP0|A0A0L9TZP0_PHAAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0299500 LjG1.1_chr5 61594724 61597988 -
3 domain predictions
2 GO terms
LotjaGi5g1v0365200.1
n.a. Signal peptide peptidase-like protein; TAIR: AT2G43070.1 SIGNAL PEPTIDE PEPTIDASE-LIKE 3; Swiss-Prot: sp|Q53P98|SIPL2_ORYSJ Signal peptide peptidase-like 2; TrEMBL-Plants: tr|A0A072VS87|A0A072VS87_MEDTR Signal peptide peptidase-like protein; Found in the gene: LotjaGi5g1v0365200 LjG1.1_chr5 67978054 67985394 +
3 domain predictions
2 GO terms