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| Field | Value |
|---|---|
| Gene ID | Lj1g3v2036740 |
| Transcript ID | Lj1g3v2036740.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: beta-adaptin-like protein A-like isoform X2 [Cicer arietinum] gi|502132000|ref|XP_004501190.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PIRSF | 3 | 548 | 546 | 2.20E-117 | ||
| PANTHER | 7 | 529 | 523 | 6.40E-270 | – | |
| SUPERFAMILY | 7 | 306 | 300 | 2.04E-41 | ||
| PANTHER | 7 | 529 | 523 | 6.40E-270 | ||
| Gene3D | 7 | 288 | 282 | 1.40E-60 | ||
| Pfam | 23 | 260 | 238 | 7.30E-34 | ||
| MobiDBLite | 346 | 374 | 29 | – | – | |
| SMART | 426 | 543 | 118 | 5.70E-27 | ||
| Pfam | 430 | 542 | 113 | 9.00E-28 | ||
| Gene3D | 435 | 542 | 108 | 5.80E-06 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Intracellular protein transport | The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell. | ||
| Biological process | Protein transport | The directed movement of proteins into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
| Biological process | Vesicle-mediated transport | A cellular transport process in which transported substances are moved in membrane-bounded vesicles; transported substances are enclosed in the vesicle lumen or located in the vesicle membrane. The process begins with a step that directs a substance to the forming vesicle, and includes vesicle budding and coating. Vesicles are then targeted to, and fuse with, an acceptor membrane. | ||
| Cellular component | Membrane coat | Any of several different proteinaceous coats that can associate with membranes. Membrane coats include those formed by clathrin plus an adaptor complex, the COPI and COPII complexes, and possibly others. They are found associated with membranes on many vesicles as well as other membrane features such as pits and perhaps tubules. | ||
| Cellular component | Clathrin adaptor complex | A membrane coat adaptor complex that links clathrin to a membrane. | ||
| Molecular function | Clathrin binding | Interacting selectively and non-covalently with a clathrin heavy or light chain, the main components of the coat of coated vesicles and coated pits, and which also occurs in synaptic vesicles. |
Expression pattern of Lj1g3v2036740.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v2036740.1, powered by CORGI.
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