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IPR026739 is a AP complex subunit beta.
<p>Adaptor protein (AP) complexes function in protein transport via transport vesicles in different membrane traffic pathways. AP complexes are involved in the formation of clathrin-coated vesicles (CCVs) by recruiting the scaffold protein, clathrin. AP complexes are also involved in the cargo selection by recognising the sorting signals in proteins. Several AP complexes have been identified: AP-2 mediates endocytosis from the plasma membrane, while AP-1, AP-3 and AP-4 play a role in the endosomal/lysosomal sorting pathways [[cite:PUB00061728], [cite:PUB00061729]]. AP complexes are heterotetramers which consist of two large subunits, one medium subunit and one small subunit. One of the large subunits (alpha, gamma, delta and epsilon) mediates binding to the target membrane. The other large subunit (beta) recruits clathrin through the clathrin-binding sequence [[cite:PUB00061730]].</p>
This description is obtained from EB-eye REST.
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Vesicle-mediated transport | A cellular transport process in which transported substances are moved in membrane-bounded vesicles; transported substances are enclosed in the vesicle lumen or located in the vesicle membrane. The process begins with a step that directs a substance to the forming vesicle, and includes vesicle budding and coating. Vesicles are then targeted to, and fuse with, an acceptor membrane. |
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | PREDICTED: beta-adaptin-like protein A-like isoform X2 [Cicer arietinum] gi|502132000|ref|XP_004501190.1| | 17 | ||
| – | PREDICTED: beta-adaptin-like protein A-like isoform X1 [Cicer arietinum] gi|502131998|ref|XP_004501189.1| | 17 | ||
| – | PREDICTED: AP3-complex subunit beta-A-like [Glycine max] gi|356501063|ref|XP_003519348.1| | 13 | ||
| – | PREDICTED: AP3-complex subunit beta-A-like [Glycine max] gi|356501063|ref|XP_003519348.1| | 13 | ||
| – | PREDICTED: beta-adaptin-like protein B-like [Cicer arietinum] gi|502144336|ref|XP_004505660.1| | 11 | ||
| – | PREDICTED: beta-adaptin-like protein B-like [Cicer arietinum] gi|502144336|ref|XP_004505660.1| | 26 | ||
| – | Beta-adaptin-like protein; TAIR: AT3G55480.2 protein affected trafficking 2; Swiss-Prot: sp|Q9M2T1|AP3BA_ARATH AP3-complex subunit beta-A; TrEMBL-Plants: tr|K7KAL6|K7KAL6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0090500 | 14 | ||
| – | Beta-adaptin-like protein; TAIR: AT5G11490.1 adaptin family protein; Swiss-Prot: sp|Q9LDK9|APBLA_ARATH Beta-adaptin-like protein A; TrEMBL-Plants: tr|A0A072V2B0|A0A072V2B0_MEDTR Beta-adaptin-like protein; Found in the gene: LotjaGi1g1v0399500 | 17 | ||
| – | Beta-adaptin-like protein; TAIR: AT5G11490.1 adaptin family protein; Swiss-Prot: sp|Q9LDK9|APBLA_ARATH Beta-adaptin-like protein A; TrEMBL-Plants: tr|A0A151TDQ2|A0A151TDQ2_CAJCA Beta-adaptin-like protein; Found in the gene: LotjaGi1g1v0399500 | 17 | ||
| – | Beta-adaptin-like protein; TAIR: AT5G11490.1 adaptin family protein; Swiss-Prot: sp|Q9LDK9|APBLA_ARATH Beta-adaptin-like protein A; TrEMBL-Plants: tr|A0A151TDQ2|A0A151TDQ2_CAJCA Beta-adaptin-like protein; Found in the gene: LotjaGi1g1v0399500 | 17 | ||
| – | Beta-adaptin-like protein; TAIR: AT5G11490.1 adaptin family protein; Swiss-Prot: sp|Q9LDK9|APBLA_ARATH Beta-adaptin-like protein A; TrEMBL-Plants: tr|A0A151TDQ2|A0A151TDQ2_CAJCA Beta-adaptin-like protein; Found in the gene: LotjaGi1g1v0399500 | 17 | ||
| – | Beta-adaptin-like protein; TAIR: AT4G23460.1 Adaptin family protein; Swiss-Prot: sp|O81742|APBLC_ARATH Beta-adaptin-like protein C; TrEMBL-Plants: tr|I1LPD3|I1LPD3_SOYBN Beta-adaptin-like protein; Found in the gene: LotjaGi3g1v0534900 | 26 | ||
| – | Beta-adaptin-like protein; TAIR: AT4G23460.1 Adaptin family protein; Swiss-Prot: sp|O81742|APBLC_ARATH Beta-adaptin-like protein C; TrEMBL-Plants: tr|I1LPD3|I1LPD3_SOYBN Beta-adaptin-like protein; Found in the gene: LotjaGi3g1v0534900 | 24 | ||
| – | Beta-adaptin-like protein; TAIR: AT4G23460.1 Adaptin family protein; Swiss-Prot: sp|O81742|APBLC_ARATH Beta-adaptin-like protein C; TrEMBL-Plants: tr|I1LPD3|I1LPD3_SOYBN Beta-adaptin-like protein; Found in the gene: LotjaGi3g1v0534900 | 24 | ||
| – | Beta-adaptin-like protein; TAIR: AT4G23460.1 Adaptin family protein; Swiss-Prot: sp|O81742|APBLC_ARATH Beta-adaptin-like protein C; TrEMBL-Plants: tr|A0A151SCZ4|A0A151SCZ4_CAJCA AP-1 complex subunit beta-1; Found in the gene: LotjaGi3g1v0534900 | 24 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| mobidb-lite | MobiDBLite | 1 | 6.67 |