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Lj1g3v2093240.2

Overview

Field Value
Gene ID Lj1g3v2093240
Transcript ID Lj1g3v2093240.2
Related isoforms 1
Lotus japonicus genome version MG20 v3.0
Description Casein kinase I protein [Theobroma cacao] gi|508782527|gb|EOY29783.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
MobiDBLite
mobidb-lite
1 24 24 – –
MobiDBLite
mobidb-lite
68 103 36 – –
PANTHER
PTHR11909
71 668 598 0 –
PANTHER
PTHR11909:SF73
71 668 598 0 –
CDD
cd14016
110 379 270 2.28E-135 –
SUPERFAMILY
SSF56112
110 384 275 1.50E-61
IPR011009
ProSiteProfiles
PS50011
110 389 280 23.552
IPR000719
Pfam
PF00069
110 337 228 1.80E-18
IPR000719
SMART
SM00220
110 401 292 1.20E-11
IPR000719
Gene3D
G3DSA:3.30.200.20
113 191 79 3.30E-23 –
ProSitePatterns
PS00107
116 142 27 –
IPR017441
Gene3D
G3DSA:1.10.510.10
194 375 182 1.50E-26 –
ProSitePatterns
PS00108
230 242 13 –
IPR008271

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

Genome browser

LORE1 insertions 16

Expression data

Expression pattern

Expression pattern of Lj1g3v2093240.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj1g3v2093240.2, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.