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| Field | Value |
|---|---|
| Gene ID | Lj1g3v2128340 |
| Transcript ID | Lj1g3v2128340.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: AP-4 complex subunit mu-like [Glycine max] gi|356510108|ref|XP_003523782.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 150 | 150 | 2.90E-97 | – | |
| PANTHER | 1 | 150 | 150 | 2.90E-97 | – | |
| Gene3D | 2 | 142 | 141 | 2.40E-42 | – | |
| SUPERFAMILY | 2 | 142 | 141 | 4.26E-35 | ||
| PRINTS | 13 | 33 | 21 | 3.60E-21 | ||
| PRINTS | 102 | 129 | 28 | 3.60E-21 | ||
| PANTHER | 166 | 271 | 106 | 2.90E-97 | – | |
| PANTHER | 166 | 271 | 106 | 2.90E-97 | – | |
| Pfam | 182 | 272 | 91 | 3.30E-25 | ||
| SUPERFAMILY | 182 | 272 | 91 | 2.48E-27 | ||
| Gene3D | 182 | 272 | 91 | 2.90E-26 | – | |
| ProSiteProfiles | 184 | 274 | 91 | 17.094 | ||
| PRINTS | 249 | 274 | 26 | 3.60E-21 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Intracellular protein transport | The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell. | ||
| Biological process | Vesicle-mediated transport | A cellular transport process in which transported substances are moved in membrane-bounded vesicles; transported substances are enclosed in the vesicle lumen or located in the vesicle membrane. The process begins with a step that directs a substance to the forming vesicle, and includes vesicle budding and coating. Vesicles are then targeted to, and fuse with, an acceptor membrane. | ||
| Cellular component | Clathrin adaptor complex | A membrane coat adaptor complex that links clathrin to a membrane. |
Expression pattern of Lj1g3v2128340.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v2128340.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.