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| Field | Value |
|---|---|
| Gene ID | Lj1g3v2372140 |
| Transcript ID | Lj1g3v2372140.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: chlorophyll synthase, chloroplastic-like isoform X2 [Cicer arietinum] gi|502104212|ref|XP_004492466.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 377 | 377 | 5.60E-258 | – | |
| Phobius | 1 | 175 | 175 | – | – | |
| SignalP | 1 | 22 | 22 | – | – | |
| PANTHER | 1 | 377 | 377 | 5.60E-258 | – | |
| TIGRFAM | 73 | 377 | 305 | 5.70E-186 | ||
| TIGRFAM | 88 | 374 | 287 | 6.30E-111 | ||
| CDD | 90 | 372 | 283 | 8.31E-150 | ||
| Pfam | 101 | 347 | 247 | 1.00E-38 | ||
| TMHMM | 173 | 195 | 23 | – | – | |
| Phobius | 176 | 194 | 19 | – | – | |
| Phobius | 195 | 199 | 5 | – | – | |
| Phobius | 200 | 215 | 16 | – | – | |
| TMHMM | 200 | 217 | 18 | – | – | |
| Phobius | 216 | 226 | 11 | – | – | |
| Phobius | 227 | 244 | 18 | – | – | |
| TMHMM | 227 | 249 | 23 | – | – | |
| Phobius | 245 | 255 | 11 | – | – | |
| TMHMM | 256 | 273 | 18 | – | – | |
| Phobius | 256 | 277 | 22 | – | – | |
| Phobius | 278 | 297 | 20 | – | – | |
| Phobius | 298 | 319 | 22 | – | – | |
| Phobius | 320 | 324 | 5 | – | – | |
| TMHMM | 324 | 346 | 23 | – | – | |
| Phobius | 325 | 346 | 22 | – | – | |
| Phobius | 347 | 357 | 11 | – | – | |
| Phobius | 358 | 376 | 19 | – | – | |
| Phobius | 377 | 377 | 1 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Chlorophyll biosynthetic process | The chemical reactions and pathways resulting in the formation of chlorophyll, any compound of magnesium complexed in a porphyrin (tetrapyrrole) ring and which functions as a photosynthetic pigment, from less complex precursors. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transferase activity, transferring alkyl or aryl (other than methyl) groups | Catalysis of the transfer of an alkyl or aryl (but not methyl) group from one compound (donor) to another (acceptor). | ||
| Molecular function | Chlorophyll synthetase activity | Catalysis of the reaction: chlorophyllide a + 2 H(+) + phytyl diphosphate = chlorophyll a + diphosphate. |
Expression pattern of Lj1g3v2372140.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v2372140.1, powered by CORGI.
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