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| Field | Value |
|---|---|
| Gene ID | Lj1g3v2372380 |
| Transcript ID | Lj1g3v2372380.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Ammonium transporter 3 member [Medicago truncatula] gi|357506079|ref|XP_003623328.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 23 | 23 | – | – | |
| PANTHER | 4 | 104 | 101 | 0 | – | |
| PANTHER | 4 | 104 | 101 | 0 | ||
| SUPERFAMILY | 17 | 430 | 414 | 5.10E-100 | ||
| Gene3D | 17 | 430 | 414 | 8.80E-116 | ||
| TIGRFAM | 22 | 448 | 427 | 4.20E-115 | ||
| Phobius | 24 | 46 | 23 | – | – | |
| TMHMM | 24 | 46 | 23 | – | – | |
| Pfam | 24 | 448 | 425 | 5.50E-82 | ||
| Phobius | 47 | 57 | 11 | – | – | |
| Phobius | 58 | 80 | 23 | – | – | |
| TMHMM | 59 | 81 | 23 | – | – | |
| Phobius | 81 | 133 | 53 | – | – | |
| PANTHER | 125 | 467 | 343 | 0 | ||
| PANTHER | 125 | 467 | 343 | 0 | – | |
| TMHMM | 131 | 153 | 23 | – | – | |
| Phobius | 134 | 153 | 20 | – | – | |
| PRINTS | 137 | 153 | 17 | 1.00E-08 | ||
| Phobius | 154 | 164 | 11 | – | – | |
| TMHMM | 160 | 182 | 23 | – | – | |
| Phobius | 165 | 186 | 22 | – | – | |
| Phobius | 187 | 197 | 11 | – | – | |
| ProSitePatterns | 193 | 218 | 26 | – | ||
| TMHMM | 197 | 216 | 20 | – | – | |
| Phobius | 198 | 216 | 19 | – | – | |
| Phobius | 217 | 227 | 11 | – | – | |
| Phobius | 228 | 248 | 21 | – | – | |
| TMHMM | 229 | 248 | 20 | – | – | |
| PRINTS | 232 | 250 | 19 | 1.00E-08 | ||
| Phobius | 249 | 259 | 11 | – | – | |
| Phobius | 260 | 284 | 25 | – | – | |
| TMHMM | 263 | 285 | 23 | – | – | |
| PRINTS | 263 | 285 | 23 | 1.00E-08 | ||
| Phobius | 285 | 290 | 6 | – | – | |
| TMHMM | 290 | 312 | 23 | – | – | |
| Phobius | 291 | 309 | 19 | – | – | |
| Phobius | 310 | 314 | 5 | – | – | |
| Phobius | 315 | 335 | 21 | – | – | |
| TMHMM | 316 | 335 | 20 | – | – | |
| PRINTS | 318 | 336 | 19 | 1.00E-08 | ||
| Phobius | 336 | 355 | 20 | – | – | |
| TMHMM | 348 | 370 | 23 | – | – | |
| Phobius | 356 | 381 | 26 | – | – | |
| PRINTS | 356 | 372 | 17 | 1.00E-08 | ||
| Phobius | 382 | 400 | 19 | – | – | |
| TMHMM | 400 | 422 | 23 | – | – | |
| Phobius | 401 | 426 | 26 | – | – | |
| Phobius | 427 | 485 | 59 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Ammonium transmembrane transporter activity | Enables the transfer of ammonium from one side of a membrane to the other. Ammonium is the cation NH4+ which is formed from N2 by root-nodule bacteria in leguminous plants and is an excretory product in ammonotelic animals. | ||
| Biological process | Ammonium transport | The directed movement of ammonium into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Ammonium is the cation NH4+ which is formed from N2 by root-nodule bacteria in leguminous plants and is an excretory product in ammonotelic animals. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Biological process | Ammonium transmembrane transport | The process in which ammonium is transported across a membrane. Ammonium is the cation NH4+. |
Expression pattern of Lj1g3v2372380.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v2372380.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.