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| Field | Value |
|---|---|
| Gene ID | Lj1g3v2377970 |
| Transcript ID | Lj1g3v2377970.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: MATE efflux family protein 2, chloroplastic-like isoform X1 [Cicer arietinum] gi|502104312|ref|XP_004492499.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 67 | 67 | 1.30E-273 | – | |
| SignalP | 1 | 15 | 15 | – | – | |
| Phobius | 1 | 2 | 2 | – | – | |
| PANTHER | 1 | 67 | 67 | 1.30E-273 | – | |
| Phobius | 1 | 15 | 15 | – | – | |
| CDD | 2 | 432 | 431 | 9.75E-89 | – | |
| Phobius | 3 | 10 | 8 | – | – | |
| TIGRFAM | 9 | 414 | 406 | 8.40E-90 | ||
| Phobius | 11 | 15 | 5 | – | – | |
| Phobius | 16 | 24 | 9 | – | – | |
| Phobius | 25 | 49 | 25 | – | – | |
| TMHMM | 27 | 49 | 23 | – | – | |
| Phobius | 50 | 91 | 42 | – | – | |
| Pfam | 83 | 187 | 105 | 6.30E-10 | ||
| PANTHER | 83 | 437 | 355 | 1.30E-273 | – | |
| PANTHER | 83 | 437 | 355 | 1.30E-273 | – | |
| Phobius | 92 | 121 | 30 | – | – | |
| TMHMM | 100 | 122 | 23 | – | – | |
| Phobius | 122 | 140 | 19 | – | – | |
| Phobius | 141 | 159 | 19 | – | – | |
| TMHMM | 142 | 164 | 23 | – | – | |
| Phobius | 160 | 170 | 11 | – | – | |
| Phobius | 171 | 192 | 22 | – | – | |
| TMHMM | 171 | 193 | 23 | – | – | |
| Phobius | 193 | 197 | 5 | – | – | |
| TMHMM | 197 | 219 | 23 | – | – | |
| Phobius | 198 | 216 | 19 | – | – | |
| Phobius | 217 | 236 | 20 | – | – | |
| Phobius | 237 | 257 | 21 | – | – | |
| TMHMM | 240 | 262 | 23 | – | – | |
| Pfam | 250 | 394 | 145 | 1.40E-14 | ||
| Phobius | 258 | 276 | 19 | – | – | |
| Phobius | 277 | 300 | 24 | – | – | |
| TMHMM | 277 | 299 | 23 | – | – | |
| Phobius | 301 | 311 | 11 | – | – | |
| Phobius | 312 | 336 | 25 | – | – | |
| TMHMM | 320 | 342 | 23 | – | – | |
| Phobius | 337 | 355 | 19 | – | – | |
| Phobius | 356 | 378 | 23 | – | – | |
| TMHMM | 357 | 379 | 23 | – | – | |
| Phobius | 379 | 384 | 6 | – | – | |
| Phobius | 385 | 408 | 24 | – | – | |
| TMHMM | 386 | 408 | 23 | – | – | |
| Phobius | 409 | 413 | 5 | – | – | |
| TMHMM | 412 | 434 | 23 | – | – | |
| Phobius | 414 | 432 | 19 | – | – | |
| Phobius | 433 | 437 | 5 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Antiporter activity | Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy. The reaction is: solute A(out) + solute B(in) = solute A(in) + solute B(out). | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Xenobiotic transmembrane transporter activity | Enables the directed movement of a xenobiotic, a compound foreign to living organisms, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj1g3v2377970.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v2377970.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.