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Lj1g3v2442920.4

Overview

Field Value
Gene ID Lj1g3v2442920
Transcript ID Lj1g3v2442920.4
Related isoforms 3
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: regulatory-associated protein of TOR 1-like [Glycine max] gi|356530199|ref|XP_003533671.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
SMART
SM01302
1 75 75 5.00E-07
IPR029347
Pfam
PF14538
7 74 68 8.90E-26
IPR029347
PRINTS
PR01547
12 37 26 1.80E-116 –
PANTHER
PTHR12848
19 692 674 0
IPR004083
PANTHER
PTHR12848:SF16
19 692 674 0 –
PRINTS
PR01547
39 63 25 1.80E-116 –
PRINTS
PR01547
110 130 21 1.80E-116 –
PRINTS
PR01547
148 175 28 1.80E-116 –
PRINTS
PR01547
183 207 25 1.80E-116 –
SUPERFAMILY
SSF48371
256 574 319 4.94E-32
IPR016024
PRINTS
PR01547
259 289 31 1.80E-116 –
PRINTS
PR01547
290 311 22 1.80E-116 –
Gene3D
G3DSA:1.25.10.10
300 553 254 1.50E-17
IPR011989
PRINTS
PR01547
313 332 20 1.80E-116 –
PRINTS
PR01547
337 353 17 1.80E-116 –
MobiDBLite
mobidb-lite
613 643 31 – –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0031929
Biological process TOR signaling A series of molecular signals mediated by TOR (Target of rapamycin) proteins, members of the phosphoinositide (PI) 3-kinase related kinase (PIKK) family that act as serine/threonine kinases in response to nutrient availability or growth factors.
Subterm of
GO:0031931
Cellular component TORC1 complex A protein complex that contains at least TOR (target of rapamycin) and Raptor (regulatory-associated protein of TOR), or orthologs of, in complex with other signaling components. Mediates the phosphorylation and activation of S6K. In Saccharomyces, the complex contains Kog1p, Lst8p, Tco89p, and either Tor1p or Tor2p.
Subterm of

Genome browser

LORE1 insertions 2

Expression data

Expression pattern

Expression pattern of Lj1g3v2442920.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj1g3v2442920.4, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.