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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR003609
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 150 results. Now displaying 1 of 3 with 50 rows per page. This search has taken 5.474s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0042119.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290-like isoform X2 [Cicer arietinum] gi|502166655|ref|XP_004513948.1| chr0 13849269 13851390 -
4 domain predictions
 –
Lj0g3v0059499.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290-like isoform X2 [Cicer arietinum] gi|502166662|ref|XP_004513950.1| chr0 19683288 19688507 +
4 domain predictions
 –
Lj0g3v0059509.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290-like [Glycine max] gi|356545297|ref|XP_003541080.1| chr0 19690149 19694423 +
4 domain predictions
 –
Lj0g3v0112879.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290-like [Glycine max] gi|356530645|ref|XP_003533891.1| chr0 49267932 49271244 +
4 domain predictions
 –
Lj0g3v0112879.2
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290-like isoform X1 [Cicer arietinum] gi|502166659|ref|XP_004513949.1| chr0 49268904 49272257 +
4 domain predictions
 –
Lj0g3v0129129.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290-like [Glycine max] gi|356514945|ref|XP_003526162.1| chr0 58411938 58415932 -
4 domain predictions
 –
Lj0g3v0132429.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290-like [Glycine max] gi|356514903|ref|XP_003526141.1| chr0 60436549 60444443 +
4 domain predictions
 –
Lj0g3v0171409.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290-like [Glycine max] gi|356514935|ref|XP_003526157.1| chr0 82161320 82169128 -
4 domain predictions
 –
Lj0g3v0171409.2
n.a. Cysteine-rich receptor-like protein kinase [Medicago truncatula] gi|357474863|ref|XP_003607717.1| chr0 82167278 82169128 -
4 domain predictions
 –
Lj0g3v0175119.1
n.a. n.a. chr0 84497466 84498714 -
4 domain predictions
 –
Lj0g3v0193779.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290-like [Cicer arietinum] gi|502084183|ref|XP_004487641.1| chr0 94600710 94603351 +
4 domain predictions
 –
Lj0g3v0193869.1
n.a. Serine/threonine protein kinase [Medicago truncatula] gi|357452493|ref|XP_003596523.1| chr0 94633989 94636695 +
4 domain predictions
 –
Lj0g3v0228499.1
n.a. PREDICTED: receptor-like serine/threonine-protein kinase SD1-8-like [Glycine max] gi|356546692|ref|XP_003541757.1| chr0 118117646 118118645 +
4 domain predictions
 –
Lj0g3v0252549.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase SD2-2-like [Cicer arietinum] gi|502157130|ref|XP_004510769.1| chr0 130962861 130966414 +
2 domain predictions
 –
Lj0g3v0293419.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g11330-like [Cicer arietinum] gi|502178680|ref|XP_004516311.1| chr0 152306620 152310281 +
3 domain predictions
 –
Lj0g3v0309109.1
n.a. Serine/threonine protein kinase [Medicago truncatula] gi|357452493|ref|XP_003596523.1| chr0 161457127 161460340 +
4 domain predictions
 –
Lj0g3v0320629.1
n.a. n.a. chr0 167331017 167344608 -
4 domain predictions
 –
Lj0g3v0320639.1
n.a. Cysteine-rich receptor-like protein kinase [Medicago truncatula] gi|357474863|ref|XP_003607717.1| chr0 167331537 167332858 +
4 domain predictions
 –
Lj0g3v0320649.1
n.a. Cysteine-rich receptor-like protein kinase [Medicago truncatula] gi|357474863|ref|XP_003607717.1| chr0 167343050 167344851 +
4 domain predictions
 –
Lj0g3v0321389.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130-like [Cicer arietinum] gi|502083045|ref|XP_004487351.1| chr0 167813554 167814424 +
4 domain predictions
 –
Lj0g3v0321429.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130-like [Cicer arietinum] gi|502083045|ref|XP_004487351.1| chr0 167819044 167822055 +
4 domain predictions
 –
Lj0g3v0322429.1
n.a. LRR receptor-like serine/threonine-protein kinase HSL2 [Medicago truncatula] gi|357458063|ref|XP_003599312.1| chr0 168406859 168409546 +
2 domain predictions
 –
Lj0g3v0332939.1
n.a. Somatic embryogenesis receptor kinase [Medicago truncatula] gi|357458087|ref|XP_003599324.1| chr0 174230908 174233819 +
3 domain predictions
 –
Lj0g3v0348039.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130-like [Glycine max] gi|356517594|ref|XP_003527472.1| chr0 182652330 182655652 +
4 domain predictions
 –
Lj0g3v0355429.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290-like isoform X2 [Cicer arietinum] gi|502166655|ref|XP_004513948.1| chr0 187215457 187219003 +
4 domain predictions
 –
Lj0g3v0356899.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290-like [Cicer arietinum] gi|502084183|ref|XP_004487641.1| chr0 187938143 187941462 -
4 domain predictions
 –
Lj0g3v0358399.1
n.a. Cysteine-rich receptor-like protein kinase [Medicago truncatula] gi|357453577|ref|XP_003597066.1| chr0 188648804 188654509 -
3 domain predictions
 –
Lj1g3v1687840.1
n.a. Cysteine-rich receptor-like protein kinase [Medicago truncatula] gi|357465633|ref|XP_003603101.1| chr1 20084740 20087792 -
3 domain predictions
 –
Lj1g3v2023010.1
n.a. S-locus lectin protein kinase family protein isoform 1 [Theobroma cacao] gi|508721005|gb|EOY12902.1| chr1 23742959 23745766 +
4 domain predictions
 –
Lj1g3v2033030.1
n.a. S-locus lectin protein kinase family protein isoform 2, partial [Theobroma cacao] gi|508721006|gb|EOY12903.1| chr1 23753092 23756677 +
4 domain predictions
 –
Lj1g3v2445990.1
n.a. PREDICTED: PAN domain-containing protein At5g03700-like [Glycine max] gi|356566760|ref|XP_003551596.1| chr1 28559123 28561498 +
2 domain predictions
 –
Lj1g3v2611530.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g11330-like [Glycine max] gi|356524497|ref|XP_003530865.1| chr1 30273486 30276880 -
4 domain predictions
 –
Lj1g3v3020950.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290-like [Glycine max] gi|356514874|ref|XP_003526127.1| chr1 34258373 34259829 +
4 domain predictions
 –
Lj1g3v3020960.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290-like [Glycine max] gi|356514874|ref|XP_003526127.1| chr1 34258373 34261174 +
4 domain predictions
 –
Lj1g3v4275470.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase SD3-1-like [Glycine max] gi|356504803|ref|XP_003521184.1| chr1 50298942 50302843 -
4 domain predictions
 –
Lj1g3v4485320.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290-like [Glycine max] gi|356545297|ref|XP_003541080.1| chr1 52815433 52815803 +
3 domain predictions
 –
Lj2g3v1550250.2
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290-like [Glycine max] gi|356514870|ref|XP_003526125.1| chr2 24633936 24636365 -
4 domain predictions
 –
Lj3g3v0065490.1
n.a. S-locus-specific glycoprotein S6 [Medicago truncatula] gi|357455241|ref|XP_003597901.1| chr3 638626 644174 +
3 domain predictions
 –
Lj3g3v0211990.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase CES101-like [Glycine max] gi|356556159|ref|XP_003546394.1| chr3 1332254 1338090 +
3 domain predictions
 –
Lj3g3v0392830.1
n.a. Cysteine-rich receptor-like protein kinase [Medicago truncatula] gi|357515961|ref|XP_003628269.1| chr3 3171239 3176050 +
3 domain predictions
 –
Lj3g3v0392830.2
n.a. Cysteine-rich receptor-like protein kinase [Medicago truncatula] gi|357515961|ref|XP_003628269.1| chr3 3172546 3176050 +
3 domain predictions
 –
Lj3g3v0392840.1
n.a. Cysteine-rich receptor-like protein kinase [Medicago truncatula] gi|357515961|ref|XP_003628269.1| chr3 3178342 3181288 +
3 domain predictions
 –
Lj3g3v0685950.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290-like [Glycine max] gi|356514866|ref|XP_003526123.1| chr3 7565909 7570099 +
4 domain predictions
 –
Lj3g3v0686990.1
n.a. n.a. chr3 7584149 7588663 -
2 domain predictions
 –
Lj3g3v0697000.3
n.a. Serine/threonine protein kinase [Medicago truncatula] gi|357452493|ref|XP_003596523.1| chr3 7593077 7595300 +
4 domain predictions
 –
Lj3g3v2887070.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290-like [Glycine max] gi|356514870|ref|XP_003526125.1| chr3 35611650 35614021 +
4 domain predictions
 –
Lj3g3v2887090.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290-like [Glycine max] gi|356514876|ref|XP_003526128.1| chr3 35626507 35627893 +
4 domain predictions
 –
Lj3g3v2887100.2
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290-like [Glycine max] gi|356514870|ref|XP_003526125.1| chr3 35627219 35630129 +
4 domain predictions
 –
Lj3g3v2887190.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130-like [Cicer arietinum] gi|502165385|ref|XP_004513556.1| chr3 35653399 35656512 -
4 domain predictions
 –
Lj3g3v2888260.1
n.a. n.a. chr3 35690440 35700132 -
2 domain predictions
 –