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Lj1g3v2512570.1

Overview

Field Value
Gene ID Lj1g3v2512570
Transcript ID Lj1g3v2512570.1
Related isoforms 2
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: serine/threonine-protein kinase HT1-like [Glycine max] gi|356532165|ref|XP_003534644.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
MobiDBLite
mobidb-lite
1 23 23 – –
PANTHER
PTHR23257:SF531
7 357 351 1.20E-240 –
PANTHER
PTHR23257
7 357 351 1.20E-240 –
Gene3D
G3DSA:3.30.200.20
37 114 78 9.40E-22 –
SUPERFAMILY
SSF56112
43 336 294 3.37E-78
IPR011009
SMART
SM00220
45 315 271 7.20E-70
IPR000719
ProSiteProfiles
PS50011
45 315 271 44.979
IPR000719
Pfam
PF07714
47 311 265 4.70E-60
IPR001245
ProSitePatterns
PS00107
51 77 27 –
IPR017441
CDD
cd13999
51 311 261 8.54E-113 –
Gene3D
G3DSA:1.10.510.10
115 310 196 6.00E-55 –
PRINTS
PR00109
126 139 14 3.50E-10
IPR001245
PRINTS
PR00109
164 182 19 3.50E-10
IPR001245
ProSitePatterns
PS00108
170 182 13 –
IPR008271
PRINTS
PR00109
238 260 23 3.50E-10
IPR001245
PRINTS
PR00109
282 304 23 3.50E-10
IPR001245
MobiDBLite
mobidb-lite
322 345 24 – –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

Genome browser

LORE1 insertions 13

Expression data

Expression pattern

Expression pattern of Lj1g3v2512570.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…

Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj1g3v2512570.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.