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Lj1g3v2512720.2

Overview

Field Value
Gene ID Lj1g3v2512720
Transcript ID Lj1g3v2512720.2
Related isoforms 1
Lotus japonicus genome version MG20 v3.0
Description with no lysine kinase 10 [Glycine max] gi|351723577|ref|NP_001236004.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Phobius
CYTOPLASMIC_DOMAIN
1 70 70 – –
PANTHER
PTHR13902:SF68
1 401 401 0 –
PANTHER
PTHR13902
1 401 401 0 –
Phobius
TRANSMEMBRANE
71 96 26 – –
Phobius
NON_CYTOPLASMIC_DOMAIN
97 715 619 – –
Gene3D
G3DSA:3.30.200.20
128 234 107 1.20E-15 –
CDD
cd13983
131 391 261 1.88E-150 –
SMART
SM00220
133 391 259 2.90E-57
IPR000719
ProSiteProfiles
PS50011
133 391 259 37.135
IPR000719
SUPERFAMILY
SSF56112
135 426 292 4.72E-63
IPR011009
Pfam
PF00069
137 391 255 1.30E-43
IPR000719
Gene3D
G3DSA:1.10.510.10
235 429 195 1.30E-46 –
ProSitePatterns
PS00108
257 269 13 –
IPR008271
PANTHER
PTHR13902
423 600 178 0 –
PANTHER
PTHR13902:SF68
423 600 178 0 –
Gene3D
G3DSA:3.10.20.90
448 510 63 6.20E-08 –
MobiDBLite
mobidb-lite
539 584 46 – –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

Genome browser

LORE1 insertions 16

Expression data

Expression pattern

Expression pattern of Lj1g3v2512720.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj1g3v2512720.2, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.