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| Field | Value |
|---|---|
| Gene ID | Lj1g3v2536080 |
| Transcript ID | Lj1g3v2536080.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Para-hydroxybenzoate-polyprenyltransferase [Medicago truncatula] gi|357506705|ref|XP_003623641.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 133 | 133 | – | – | |
| PANTHER | 94 | 403 | 310 | 1.10E-193 | – | |
| PANTHER | 94 | 403 | 310 | 1.10E-193 | – | |
| Hamap | 116 | 402 | 287 | 30.252 | ||
| TIGRFAM | 122 | 400 | 279 | 1.00E-110 | ||
| CDD | 128 | 400 | 273 | 1.53E-114 | – | |
| Phobius | 134 | 151 | 18 | – | – | |
| TMHMM | 134 | 151 | 18 | – | – | |
| Pfam | 139 | 383 | 245 | 8.90E-58 | ||
| Phobius | 152 | 162 | 11 | – | – | |
| TMHMM | 161 | 183 | 23 | – | – | |
| Phobius | 163 | 183 | 21 | – | – | |
| ProSitePatterns | 180 | 202 | 23 | – | ||
| Phobius | 184 | 202 | 19 | – | – | |
| Phobius | 203 | 224 | 22 | – | – | |
| TMHMM | 203 | 225 | 23 | – | – | |
| Phobius | 225 | 229 | 5 | – | – | |
| Phobius | 230 | 248 | 19 | – | – | |
| Phobius | 249 | 256 | 8 | – | – | |
| TMHMM | 252 | 274 | 23 | – | – | |
| Phobius | 257 | 274 | 18 | – | – | |
| Phobius | 275 | 285 | 11 | – | – | |
| TMHMM | 281 | 303 | 23 | – | – | |
| Phobius | 286 | 303 | 18 | – | – | |
| Phobius | 304 | 323 | 20 | – | – | |
| Phobius | 324 | 345 | 22 | – | – | |
| Phobius | 346 | 350 | 5 | – | – | |
| TMHMM | 349 | 371 | 23 | – | – | |
| Phobius | 351 | 371 | 21 | – | – | |
| Phobius | 372 | 382 | 11 | – | – | |
| TMHMM | 383 | 402 | 20 | – | – | |
| Phobius | 383 | 402 | 20 | – | – | |
| Phobius | 403 | 404 | 2 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Prenyltransferase activity | Catalysis of the transfer of a prenyl group from one compound (donor) to another (acceptor). | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transferase activity, transferring alkyl or aryl (other than methyl) groups | Catalysis of the transfer of an alkyl or aryl (but not methyl) group from one compound (donor) to another (acceptor). |
Expression pattern of Lj1g3v2536080.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v2536080.2, powered by CORGI.
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