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| Field | Value |
|---|---|
| Gene ID | Lj1g3v2536160 |
| Transcript ID | Lj1g3v2536160.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | ZIP transporter [Medicago truncatula] gi|357506723|ref|XP_003623650.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 11 | 11 | – | – | |
| Phobius | 1 | 32 | 32 | – | – | |
| SignalP | 1 | 32 | 32 | – | – | |
| Phobius | 12 | 27 | 16 | – | – | |
| TMHMM | 12 | 34 | 23 | – | – | |
| Phobius | 28 | 32 | 5 | – | – | |
| Phobius | 33 | 83 | 51 | – | – | |
| PANTHER | 63 | 334 | 272 | 1.60E-108 | – | |
| PANTHER | 63 | 334 | 272 | 1.60E-108 | – | |
| TMHMM | 82 | 104 | 23 | – | – | |
| Phobius | 84 | 104 | 21 | – | – | |
| Phobius | 105 | 110 | 6 | – | – | |
| TMHMM | 111 | 128 | 18 | – | – | |
| Phobius | 111 | 131 | 21 | – | – | |
| Phobius | 132 | 136 | 5 | – | – | |
| Phobius | 137 | 156 | 20 | – | – | |
| TMHMM | 138 | 160 | 23 | – | – | |
| Phobius | 157 | 176 | 20 | – | – | |
| Pfam | 176 | 300 | 125 | 6.50E-11 | ||
| Phobius | 177 | 193 | 17 | – | – | |
| TMHMM | 180 | 202 | 23 | – | – | |
| Phobius | 194 | 212 | 19 | – | – | |
| TMHMM | 212 | 234 | 23 | – | – | |
| Phobius | 213 | 233 | 21 | – | – | |
| Phobius | 234 | 244 | 11 | – | – | |
| Phobius | 245 | 265 | 21 | – | – | |
| Phobius | 266 | 270 | 5 | – | – | |
| TMHMM | 267 | 289 | 23 | – | – | |
| Phobius | 271 | 292 | 22 | – | – | |
| Phobius | 293 | 303 | 11 | – | – | |
| Phobius | 304 | 325 | 22 | – | – | |
| Phobius | 326 | 336 | 11 | – | – | |
| Phobius | 337 | 359 | 23 | – | – | |
| TMHMM | 337 | 359 | 23 | – | – | |
| Phobius | 360 | 365 | 6 | – | – | |
| Phobius | 366 | 382 | 17 | – | – | |
| TMHMM | 366 | 385 | 20 | – | – | |
| Phobius | 383 | 393 | 11 | – | – | |
| Phobius | 394 | 417 | 24 | – | – | |
| TMHMM | 395 | 417 | 23 | – | – | |
| Phobius | 418 | 506 | 89 | – | – | |
| TMHMM | 505 | 527 | 23 | – | – | |
| Phobius | 507 | 529 | 23 | – | – | |
| Phobius | 530 | 534 | 5 | – | – | |
| Phobius | 535 | 553 | 19 | – | – | |
| TMHMM | 537 | 559 | 23 | – | – | |
| Phobius | 554 | 564 | 11 | – | – | |
| Phobius | 565 | 585 | 21 | – | – | |
| TMHMM | 566 | 585 | 20 | – | – | |
| Phobius | 586 | 600 | 15 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Biological process | Metal ion transport | The directed movement of metal ions, any metal ion with an electric charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
| Molecular function | Metal ion transmembrane transporter activity | Enables the transfer of metal ions from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj1g3v2536160.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v2536160.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.