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| Field | Value |
|---|---|
| Gene ID | Lj1g3v2546210 |
| Transcript ID | Lj1g3v2546210.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: KH domain-containing protein At2g38610-like [Glycine max] gi|356568258|ref|XP_003552330.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 21 | 21 | – | – | |
| PANTHER | 1 | 281 | 281 | 6.00E-216 | – | |
| PANTHER | 1 | 281 | 281 | 6.00E-216 | – | |
| Pfam | 25 | 70 | 46 | 4.30E-11 | ||
| Gene3D | 131 | 259 | 129 | 1.10E-41 | ||
| SMART | 131 | 231 | 101 | 3.10E-06 | ||
| CDD | 136 | 256 | 121 | 5.30E-53 | – | |
| SUPERFAMILY | 138 | 256 | 119 | 7.03E-32 | ||
| Pfam | 147 | 182 | 36 | 1.30E-05 | ||
| ProSiteProfiles | 148 | 205 | 58 | 8.471 | ||
| MobiDBLite | 254 | 281 | 28 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleic acid binding | Interacting selectively and non-covalently with any nucleic acid. | ||
| Molecular function | RNA binding | Interacting selectively and non-covalently with an RNA molecule or a portion thereof. |
Expression pattern of Lj1g3v2546210.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v2546210.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.