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| Field | Value |
|---|---|
| Gene ID | Lj1g3v2580890 |
| Transcript ID | Lj1g3v2580890.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: transducin beta-like protein 2-like [Cicer arietinum] gi|502104745|ref|XP_004492634.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 5 | 5 | – | – | |
| TMHMM | 5 | 27 | 23 | – | – | |
| Phobius | 6 | 27 | 22 | – | – | |
| Phobius | 28 | 429 | 402 | – | – | |
| MobiDBLite | 37 | 67 | 31 | – | – | |
| SMART | 70 | 109 | 40 | 5.30E-09 | ||
| SUPERFAMILY | 73 | 421 | 349 | 4.45E-41 | ||
| PANTHER | 73 | 424 | 352 | 4.00E-201 | – | |
| PANTHER | 73 | 424 | 352 | 4.00E-201 | – | |
| Pfam | 74 | 108 | 35 | 1.40E-07 | ||
| Gene3D | 75 | 151 | 77 | 6.60E-43 | ||
| ProSiteProfiles | 77 | 118 | 42 | 11.55 | ||
| ProSiteProfiles | 77 | 118 | 42 | 12.28 | ||
| Gene3D | 187 | 423 | 237 | 6.60E-43 | ||
| SMART | 188 | 224 | 37 | 140 | ||
| ProSiteProfiles | 211 | 429 | 219 | 16.085 | ||
| SMART | 227 | 266 | 40 | 13 | ||
| SMART | 277 | 316 | 40 | 3.10E-08 | ||
| Pfam | 284 | 316 | 33 | 1.30E-06 | ||
| ProSiteProfiles | 284 | 318 | 35 | 15.22 | ||
| ProSitePatterns | 303 | 317 | 15 | – | ||
| SMART | 374 | 422 | 49 | 3.80E-04 | ||
| Pfam | 383 | 421 | 39 | 0.016 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj1g3v2580890.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v2580890.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.