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| Field | Value |
|---|---|
| Gene ID | Lj1g3v2979190 |
| Transcript ID | Lj1g3v2979190.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | RecName: Full=Casparian strip membrane protein 5] gi|487523307|sp|P0DKC2.1|CASP5_LOTJA |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 74 | 74 | – | – | |
| PANTHER | 44 | 231 | 188 | 1.00E-93 | – | |
| PANTHER | 44 | 231 | 188 | 1.00E-93 | – | |
| Pfam | 68 | 214 | 147 | 5.90E-45 | ||
| TIGRFAM | 75 | 226 | 152 | 1.30E-45 | ||
| Phobius | 75 | 93 | 19 | – | – | |
| TMHMM | 75 | 94 | 20 | – | – | |
| Phobius | 94 | 117 | 24 | – | – | |
| Phobius | 118 | 141 | 24 | – | – | |
| TMHMM | 120 | 142 | 23 | – | – | |
| Phobius | 142 | 152 | 11 | – | – | |
| Phobius | 153 | 180 | 28 | – | – | |
| TMHMM | 154 | 176 | 23 | – | – | |
| Phobius | 181 | 206 | 26 | – | – | |
| TMHMM | 206 | 228 | 23 | – | – | |
| Phobius | 207 | 228 | 22 | – | – | |
| Phobius | 229 | 231 | 3 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of Lj1g3v2979190.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v2979190.1, powered by CORGI.
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