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| Field | Value |
|---|---|
| Gene ID | Lj1g3v3278880 |
| Transcript ID | Lj1g3v3278880.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: lisH domain and HEAT repeat-containing protein KIAA1468 homolog [Glycine max] gi|356499610|ref|XP_003518631.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 11 | 11 | – | – | |
| Phobius | 12 | 28 | 17 | – | – | |
| Phobius | 29 | 756 | 728 | – | – | |
| PANTHER | 31 | 1062 | 1032 | 0 | – | |
| PANTHER | 31 | 1062 | 1032 | 0 | – | |
| Coils | 55 | 75 | 21 | – | – | |
| ProSiteProfiles | 114 | 146 | 33 | 9.34 | ||
| SMART | 114 | 146 | 33 | 0.0024 | ||
| Coils | 186 | 213 | 28 | – | – | |
| Coils | 221 | 255 | 35 | – | – | |
| Coils | 278 | 305 | 28 | – | – | |
| MobiDBLite | 367 | 406 | 40 | – | – | |
| Gene3D | 422 | 679 | 258 | 2.20E-50 | ||
| SUPERFAMILY | 426 | 639 | 214 | 8.32E-30 | ||
| SUPERFAMILY | 722 | 762 | 41 | 8.32E-30 | ||
| Gene3D | 740 | 775 | 36 | 2.20E-50 | ||
| Phobius | 757 | 780 | 24 | – | – | |
| Phobius | 781 | 800 | 20 | – | – | |
| Phobius | 801 | 819 | 19 | – | – | |
| Phobius | 820 | 1092 | 273 | – | – | |
| SUPERFAMILY | 826 | 1040 | 215 | 8.32E-30 | ||
| Gene3D | 879 | 1042 | 164 | 2.20E-50 | ||
| ProSiteProfiles | 905 | 943 | 39 | 10.349 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj1g3v3278880.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v3278880.2, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.