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| Field | Value |
|---|---|
| Gene ID | Lj1g3v3329920 |
| Transcript ID | Lj1g3v3329920.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: monosaccharide-sensing protein 2-like isoform X1 [Cicer arietinum] gi|502130538|ref|XP_004500684.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 3 | 3 | – | – | |
| Phobius | 1 | 19 | 19 | – | – | |
| PANTHER | 1 | 235 | 235 | 0 | – | |
| PANTHER | 1 | 235 | 235 | 0 | – | |
| Phobius | 4 | 14 | 11 | – | – | |
| SUPERFAMILY | 6 | 212 | 207 | 5.75E-60 | ||
| ProSiteProfiles | 7 | 713 | 707 | 34.368 | ||
| Pfam | 7 | 221 | 215 | 3.40E-54 | ||
| Gene3D | 10 | 189 | 180 | 6.30E-27 | – | |
| TMHMM | 10 | 32 | 23 | – | – | |
| CDD | 13 | 186 | 174 | 2.68E-24 | ||
| PRINTS | 15 | 25 | 11 | 3.50E-17 | ||
| Phobius | 15 | 19 | 5 | – | – | |
| Phobius | 20 | 42 | 23 | – | – | |
| Phobius | 43 | 62 | 20 | – | – | |
| TMHMM | 44 | 66 | 23 | – | – | |
| ProSitePatterns | 63 | 80 | 18 | – | ||
| Phobius | 63 | 73 | 11 | – | – | |
| TMHMM | 70 | 92 | 23 | – | – | |
| Phobius | 74 | 92 | 19 | – | – | |
| Phobius | 93 | 97 | 5 | – | – | |
| Phobius | 98 | 121 | 24 | – | – | |
| TMHMM | 99 | 121 | 23 | – | – | |
| PRINTS | 100 | 119 | 20 | 3.50E-17 | ||
| ProSitePatterns | 105 | 130 | 26 | – | ||
| Phobius | 122 | 132 | 11 | – | – | |
| Phobius | 133 | 157 | 25 | – | – | |
| TMHMM | 136 | 158 | 23 | – | – | |
| Phobius | 158 | 162 | 5 | – | – | |
| Phobius | 163 | 185 | 23 | – | – | |
| TMHMM | 165 | 187 | 23 | – | – | |
| Phobius | 186 | 514 | 329 | – | – | |
| MobiDBLite | 330 | 408 | 79 | – | – | |
| PANTHER | 493 | 737 | 245 | 0 | – | |
| PANTHER | 493 | 737 | 245 | 0 | – | |
| SUPERFAMILY | 494 | 718 | 225 | 5.75E-60 | ||
| Pfam | 499 | 721 | 223 | 5.60E-40 | ||
| Phobius | 515 | 538 | 24 | – | – | |
| CDD | 516 | 707 | 192 | 2.34E-14 | ||
| Gene3D | 518 | 714 | 197 | 6.40E-15 | – | |
| PRINTS | 526 | 536 | 11 | 3.50E-17 | ||
| Phobius | 539 | 557 | 19 | – | – | |
| Phobius | 558 | 580 | 23 | – | – | |
| TMHMM | 562 | 584 | 23 | – | – | |
| Phobius | 581 | 591 | 11 | – | – | |
| TMHMM | 591 | 613 | 23 | – | – | |
| Phobius | 592 | 613 | 22 | – | – | |
| Phobius | 614 | 618 | 5 | – | – | |
| Phobius | 619 | 646 | 28 | – | – | |
| TMHMM | 623 | 645 | 23 | – | – | |
| PRINTS | 625 | 646 | 22 | 3.50E-17 | ||
| Phobius | 647 | 657 | 11 | – | – | |
| PRINTS | 648 | 660 | 13 | 3.50E-17 | ||
| TMHMM | 658 | 680 | 23 | – | – | |
| Phobius | 658 | 678 | 21 | – | – | |
| Phobius | 679 | 683 | 5 | – | – | |
| Phobius | 684 | 707 | 24 | – | – | |
| TMHMM | 685 | 707 | 23 | – | – | |
| Phobius | 708 | 737 | 30 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj1g3v3329920.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v3329920.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.