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| Field | Value |
|---|---|
| Gene ID | Lj1g3v3343780 |
| Transcript ID | Lj1g3v3343780.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: exoglucanase xynX-like [Glycine max] gi|356509525|ref|XP_003523498.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP | 1 | 24 | 24 | – | – | |
| Phobius | 1 | 26 | 26 | – | – | |
| Phobius | 1 | 7 | 7 | – | – | |
| Phobius | 8 | 19 | 12 | – | – | |
| PANTHER | 11 | 563 | 553 | 0 | – | |
| PANTHER | 11 | 563 | 553 | 0 | – | |
| Phobius | 20 | 26 | 7 | – | – | |
| Phobius | 27 | 563 | 537 | – | – | |
| SUPERFAMILY | 78 | 158 | 81 | 4.34E-05 | ||
| Gene3D | 85 | 159 | 75 | 2.00E-06 | ||
| Gene3D | 197 | 539 | 343 | 2.80E-79 | ||
| SUPERFAMILY | 209 | 511 | 303 | 1.01E-91 | ||
| ProSiteProfiles | 209 | 505 | 297 | 34.842 | ||
| Pfam | 217 | 476 | 260 | 2.80E-46 | ||
| SMART | 255 | 506 | 252 | 2.10E-10 | ||
| PRINTS | 286 | 298 | 13 | 5.00E-06 | ||
| PRINTS | 330 | 341 | 12 | 5.00E-06 | ||
| PRINTS | 368 | 379 | 12 | 5.00E-06 | ||
| PRINTS | 401 | 413 | 13 | 5.00E-06 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Hydrolase activity, hydrolyzing O-glycosyl compounds | Catalysis of the hydrolysis of any O-glycosyl bond. | ||
| Biological process | Carbohydrate metabolic process | The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule. |
Expression pattern of Lj1g3v3343780.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v3343780.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.