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| Field | Value |
|---|---|
| Gene ID | Lj1g3v3368890 |
| Transcript ID | Lj1g3v3368890.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: zinc finger protein GIS2-like [Glycine max] gi|356508208|ref|XP_003522851.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 29 | 29 | – | – | |
| PANTHER | 1 | 254 | 254 | 7.00E-143 | – | |
| PANTHER | 1 | 254 | 254 | 7.00E-143 | – | |
| SUPERFAMILY | 37 | 82 | 46 | 3.66E-10 | ||
| Gene3D | 42 | 73 | 32 | 1.40E-10 | ||
| SMART | 46 | 62 | 17 | 4.70E-04 | ||
| Pfam | 46 | 62 | 17 | 2.90E-06 | ||
| ProSiteProfiles | 47 | 62 | 16 | 9.85 | ||
| SMART | 65 | 81 | 17 | 0.0017 | ||
| ProSiteProfiles | 66 | 79 | 14 | 9.504 | ||
| Pfam | 66 | 80 | 15 | 2.30E-05 | ||
| Gene3D | 74 | 101 | 28 | 1.10E-12 | ||
| SUPERFAMILY | 83 | 121 | 39 | 2.91E-10 | ||
| SMART | 84 | 100 | 17 | 3.80E-05 | ||
| ProSiteProfiles | 85 | 100 | 16 | 9.933 | ||
| Pfam | 85 | 100 | 16 | 4.50E-06 | ||
| Pfam | 103 | 118 | 16 | 1.80E-05 | ||
| SMART | 103 | 119 | 17 | 0.0044 | ||
| Gene3D | 104 | 137 | 34 | 1.30E-11 | ||
| ProSiteProfiles | 104 | 117 | 14 | 9.752 | ||
| SUPERFAMILY | 125 | 165 | 41 | 3.66E-11 | ||
| Pfam | 129 | 147 | 19 | 0.076 | – | |
| SMART | 129 | 145 | 17 | 0.026 | ||
| Gene3D | 138 | 156 | 19 | 2.60E-12 | ||
| SMART | 148 | 164 | 17 | 1.40E-04 | ||
| Pfam | 148 | 164 | 17 | 2.80E-06 | ||
| ProSiteProfiles | 149 | 164 | 16 | 10.015 | ||
| Gene3D | 157 | 175 | 19 | 1.10E-11 | ||
| Pfam | 167 | 183 | 17 | 0.0015 | ||
| SMART | 167 | 183 | 17 | 0.02 | ||
| ProSiteProfiles | 168 | 183 | 16 | 8.614 | ||
| Gene3D | 176 | 219 | 44 | 3.40E-09 | ||
| SUPERFAMILY | 204 | 251 | 48 | 8.37E-12 | ||
| SMART | 213 | 229 | 17 | 0.0056 | ||
| Pfam | 213 | 227 | 15 | 7.50E-07 | ||
| ProSiteProfiles | 214 | 227 | 14 | 9.142 | ||
| Gene3D | 220 | 249 | 30 | 1.40E-11 | ||
| Pfam | 233 | 249 | 17 | 1.80E-05 | ||
| SMART | 233 | 249 | 17 | 0.001 | ||
| ProSiteProfiles | 234 | 249 | 16 | 9.834 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleic acid binding | Interacting selectively and non-covalently with any nucleic acid. | ||
| Molecular function | Zinc ion binding | Interacting selectively and non-covalently with zinc (Zn) ions. |
Expression pattern of Lj1g3v3368890.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v3368890.2, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.