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PTHR23002

Source: PANTHER

Description

No description is available for this domain.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 21

Transcript Name Description Predicted domains Domain count
Lj0g3v0032889.1
– Cellular nucleic acid-binding protein [Medicago truncatula] gi|357459751|ref|XP_003600156.1|
Domains
15
Lj0g3v0254499.1
– PREDICTED: zinc finger protein GIS2-like [Glycine max] gi|356516892|ref|XP_003527126.1|
Domains
9
Lj1g3v3368890.1
– PREDICTED: zinc finger protein GIS2-like [Glycine max] gi|356516892|ref|XP_003527126.1|
Domains
9
Lj1g3v3368890.2
– PREDICTED: zinc finger protein GIS2-like [Glycine max] gi|356508208|ref|XP_003522851.1|
Domains
10
Lj2g3v2905060.1
– CM0545.280.nc [Lotus japonicus] gi|164605536|dbj|BAF98602.1|
Domains
9
Lj2g3v2905060.2
– CM0545.270.nc [Lotus japonicus] gi|164605537|dbj|BAF98603.1|
Domains
8
Lj5g3v2013630.1
– PREDICTED: DNA-binding protein HEXBP-like [Cicer arietinum] gi|502119274|ref|XP_004496562.1|
Domains
11
Lj5g3v2013640.1
– PREDICTED: titin-like [Cicer arietinum] gi|502119286|ref|XP_004496566.1|
Domains
7
Lj5g3v2013640.2
– PREDICTED: titin-like [Cicer arietinum] gi|502119286|ref|XP_004496566.1|
Domains
7
Lj6g3v1038840.1
– Cellular nucleic acid-binding protein [Medicago truncatula] gi|357493439|ref|XP_003617008.1|
Domains
10
Lj6g3v1038840.2
– Cellular nucleic acid-binding protein [Medicago truncatula] gi|357493439|ref|XP_003617008.1|
Domains
10
LotjaGi1g1v0212500_LC.1
– Gag-Pol polyprotein; TAIR: AT3G42860.1 zinc knuckle (CCHC-type) family protein; Swiss-Prot: sp|Q65XV7|RFA1C_ORYSJ Replication protein A 70 kDa DNA-binding subunit C; TrEMBL-Plants: tr|Q949L3|Q949L3_CICAR Putative polyprotein; Found in the gene: LotjaGi1g1v0212500_LC
Domains
10
LotjaGi1g1v0222900_LC.1
– Gag-Pol polyprotein; TAIR: AT3G43590.1 zinc knuckle (CCHC-type) family protein; Swiss-Prot: sp|P05895|POL_SIVVT Gag-Pol polyprotein; TrEMBL-Plants: tr|Q949L4|Q949L4_CICAR Putative polyprotein; Found in the gene: LotjaGi1g1v0222900_LC
Domains
9
LotjaGi1g1v0244200_LC.1
– Gag-Pol polyprotein; TAIR: AT4G36020.1 cold shock domain protein 1; Swiss-Prot: sp|Q8AII1|POL_SIVTN Gag-Pol polyprotein; TrEMBL-Plants: tr|Q949L4|Q949L4_CICAR Putative polyprotein; Found in the gene: LotjaGi1g1v0244200_LC
Domains
10
LotjaGi1g1v0297200_LC.1
– Gag-Pol polyprotein; TAIR: AT3G42860.1 zinc knuckle (CCHC-type) family protein; Swiss-Prot: sp|P31821|GAG_FIVT2 Gag polyprotein; TrEMBL-Plants: tr|Q949L3|Q949L3_CICAR Putative polyprotein; Found in the gene: LotjaGi1g1v0297200_LC
Domains
10
LotjaGi2g1v0022600_LC.1
– Gag polyprotein; TAIR: AT3G42860.1 zinc knuckle (CCHC-type) family protein; Swiss-Prot: sp|Q04832|HEXP_LEIMA DNA-binding protein HEXBP; TrEMBL-Plants: tr|A0A164T1U9|A0A164T1U9_DAUCA Uncharacterized protein; Found in the gene: LotjaGi2g1v0022600_LC
Domains
11
LotjaGi3g1v0149800.1
– Zinc knuckle (CCHC-type) family protein; TAIR: AT5G20220.4 zinc knuckle (CCHC-type) family protein; Swiss-Prot: sp|Q04832|HEXP_LEIMA DNA-binding protein HEXBP; TrEMBL-Plants: tr|A0A072TQL6|A0A072TQL6_MEDTR Zinc knuckle (CCHC-type) family protein; Found in the gene: LotjaGi3g1v0149800
Domains
10
LotjaGi3g1v0313300_LC.1
– Gag-Pol polyprotein; TAIR: AT1G75560.1 zinc knuckle (CCHC-type) family protein; Swiss-Prot: sp|Q65XV7|RFA1C_ORYSJ Replication protein A 70 kDa DNA-binding subunit C; TrEMBL-Plants: tr|A0A151RHT9|A0A151RHT9_CAJCA Retrotransposable element Tf2; Found in the gene: LotjaGi3g1v0313300_LC
Domains
10
LotjaGi4g1v0186500_LC.1
– Gag-Pol polyprotein; TAIR: AT3G42860.1 zinc knuckle (CCHC-type) family protein; Swiss-Prot: sp|Q02836|POL_SIVG1 Gag-Pol polyprotein; TrEMBL-Plants: tr|Q949L4|Q949L4_CICAR Putative polyprotein; Found in the gene: LotjaGi4g1v0186500_LC
Domains
9
LotjaGi4g1v0212900_LC.1
– Gag-Pol polyprotein; TAIR: AT3G53500.2 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein; Swiss-Prot: sp|P03354|POL_RSVP Gag-Pro-Pol polyprotein; TrEMBL-Plants: tr|A0A151S5E5|A0A151S5E5_CAJCA Retrovirus-related Pol polyprotein from transposon 17.6; Found in the gene: LotjaGi4g1v0212900_LC
Domains
10
LotjaGi6g1v0064900_LC.1
– Gag-Pol polyprotein; TAIR: AT3G42860.1 zinc knuckle (CCHC-type) family protein; Swiss-Prot: sp|P03354|POL_RSVP Gag-Pro-Pol polyprotein; TrEMBL-Plants: tr|Q949L3|Q949L3_CICAR Putative polyprotein; Found in the gene: LotjaGi6g1v0064900_LC
Domains
10

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
TMhelix TMHMM 1 4.76