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PF13917

Source: Pfam

Description

Zinc knuckle

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 13

Transcript Name Description Predicted domains Domain count
Lj0g3v0254499.1
– PREDICTED: zinc finger protein GIS2-like [Glycine max] gi|356516892|ref|XP_003527126.1|
Domains
9
Lj1g3v3368890.1
– PREDICTED: zinc finger protein GIS2-like [Glycine max] gi|356516892|ref|XP_003527126.1|
Domains
9
Lj1g3v3368890.2
– PREDICTED: zinc finger protein GIS2-like [Glycine max] gi|356508208|ref|XP_003522851.1|
Domains
10
Lj4g3v2267670.1
– PREDICTED: NF-kappa-B-activating protein-like [Cicer arietinum] gi|502150857|ref|XP_004508158.1|
Domains
4
Lj4g3v2267680.1
– PREDICTED: NF-kappa-B-activating protein-like [Cicer arietinum] gi|502150857|ref|XP_004508158.1|
Domains
4
Lj5g3v2258450.1
– PREDICTED: CAX-interacting protein 4-like isoform 1 [Glycine max] gi|356536406|ref|XP_003536729.1|
Domains
7
Lj5g3v2265250.1
– PREDICTED: nucleolar protein 13-like [Glycine max] gi|356536490|ref|XP_003536770.1|
Domains
20
LotjaGi1g1v0563600.1
– Gag polyprotein; TAIR: AT1G75560.1 zinc knuckle (CCHC-type) family protein; Swiss-Prot: sp|Q04832|HEXP_LEIMA DNA-binding protein HEXBP; TrEMBL-Plants: tr|K7KSE0|K7KSE0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0563600
Domains
11
LotjaGi1g1v0563600.2
– Gag polyprotein; TAIR: AT1G75560.1 zinc knuckle (CCHC-type) family protein; Swiss-Prot: sp|Q04832|HEXP_LEIMA DNA-binding protein HEXBP; TrEMBL-Plants: tr|K7KSE0|K7KSE0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0563600
Domains
11
LotjaGi1g1v0563600.3
– Gag polyprotein; TAIR: AT1G75560.1 zinc knuckle (CCHC-type) family protein; Swiss-Prot: sp|Q04832|HEXP_LEIMA DNA-binding protein HEXBP; TrEMBL-Plants: tr|K7KSE0|K7KSE0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0563600
Domains
11
LotjaGi4g1v0329900_LC.1
– Zinc finger CCHC domain-containing protein 10; TAIR: AT5G49400.1 zinc knuckle (CCHC-type) family protein; Swiss-Prot: sp|Q5EB97|ZCH10_RAT Zinc finger CCHC domain-containing protein 10; TrEMBL-Plants: tr|A0A068TS56|A0A068TS56_COFCA Uncharacterized protein; Found in the gene: LotjaGi4g1v0329900_LC
Domains
5
LotjaGi4g1v0329900_LC.2
– Zinc finger CCHC domain-containing protein 10; TAIR: AT5G49400.1 zinc knuckle (CCHC-type) family protein; Swiss-Prot: sp|Q5EB97|ZCH10_RAT Zinc finger CCHC domain-containing protein 10; TrEMBL-Plants: tr|A0A068TS56|A0A068TS56_COFCA Uncharacterized protein; Found in the gene: LotjaGi4g1v0329900_LC
Domains
5
LotjaGi5g1v0352000.1
– CAX-interacting protein 4; TAIR: AT2G28910.1 CAX interacting protein 4; Swiss-Prot: sp|Q84Y18|CXIP4_ARATH CAX-interacting protein 4; TrEMBL-Plants: tr|I3SNI2|I3SNI2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0352000
Domains
7

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
mobidb-lite MobiDBLite 1 7.69