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| Field | Value |
|---|---|
| Gene ID | Lj1g3v3392220 |
| Transcript ID | Lj1g3v3392220.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: monosaccharide-sensing protein 2-like isoform X1 [Cicer arietinum] gi|502130974|ref|XP_004500833.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 2 | 2 | – | – | |
| Phobius | 1 | 19 | 19 | – | – | |
| PANTHER | 1 | 230 | 230 | 0 | – | |
| PANTHER | 1 | 230 | 230 | 0 | – | |
| Phobius | 3 | 14 | 12 | – | – | |
| SUPERFAMILY | 5 | 210 | 206 | 4.19E-63 | ||
| ProSiteProfiles | 7 | 712 | 706 | 33.858 | ||
| Pfam | 7 | 222 | 216 | 1.30E-52 | ||
| CDD | 9 | 184 | 176 | 1.16E-25 | ||
| Gene3D | 10 | 187 | 178 | 9.90E-29 | – | |
| PRINTS | 15 | 25 | 11 | 6.10E-18 | ||
| Phobius | 15 | 19 | 5 | – | – | |
| Phobius | 20 | 42 | 23 | – | – | |
| TMHMM | 36 | 58 | 23 | – | – | |
| Phobius | 43 | 61 | 19 | – | – | |
| ProSitePatterns | 61 | 78 | 18 | – | ||
| Phobius | 62 | 72 | 11 | – | – | |
| TMHMM | 73 | 90 | 18 | – | – | |
| Phobius | 73 | 90 | 18 | – | – | |
| Phobius | 91 | 101 | 11 | – | – | |
| TMHMM | 97 | 119 | 23 | – | – | |
| PRINTS | 98 | 117 | 20 | 6.10E-18 | ||
| Phobius | 102 | 119 | 18 | – | – | |
| ProSitePatterns | 103 | 128 | 26 | – | ||
| Phobius | 120 | 130 | 11 | – | – | |
| Phobius | 131 | 155 | 25 | – | – | |
| TMHMM | 134 | 156 | 23 | – | – | |
| Phobius | 156 | 160 | 5 | – | – | |
| TMHMM | 161 | 183 | 23 | – | – | |
| Phobius | 161 | 183 | 23 | – | – | |
| Phobius | 184 | 513 | 330 | – | – | |
| MobiDBLite | 331 | 369 | 39 | – | – | |
| PANTHER | 492 | 736 | 245 | 0 | – | |
| SUPERFAMILY | 492 | 717 | 226 | 4.19E-63 | ||
| PANTHER | 492 | 736 | 245 | 0 | – | |
| Pfam | 500 | 723 | 224 | 1.20E-38 | ||
| Phobius | 514 | 537 | 24 | – | – | |
| CDD | 515 | 706 | 192 | 1.94E-09 | ||
| Gene3D | 519 | 714 | 196 | 1.30E-14 | – | |
| PRINTS | 525 | 535 | 11 | 6.10E-18 | ||
| Phobius | 538 | 556 | 19 | – | – | |
| Phobius | 557 | 579 | 23 | – | – | |
| TMHMM | 561 | 583 | 23 | – | – | |
| Phobius | 580 | 590 | 11 | – | – | |
| TMHMM | 590 | 612 | 23 | – | – | |
| Phobius | 591 | 611 | 21 | – | – | |
| Phobius | 612 | 616 | 5 | – | – | |
| Phobius | 617 | 636 | 20 | – | – | |
| TMHMM | 617 | 639 | 23 | – | – | |
| PRINTS | 624 | 645 | 22 | 6.10E-18 | ||
| Phobius | 637 | 656 | 20 | – | – | |
| PRINTS | 647 | 659 | 13 | 6.10E-18 | ||
| TMHMM | 652 | 674 | 23 | – | – | |
| Phobius | 657 | 677 | 21 | – | – | |
| Phobius | 678 | 682 | 5 | – | – | |
| Phobius | 683 | 706 | 24 | – | – | |
| TMHMM | 684 | 706 | 23 | – | – | |
| Phobius | 707 | 736 | 30 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj1g3v3392220.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v3392220.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.